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Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae)
The complete mitochondrial genome of Polyphaga plancyi is a 15,547 bp circular molecule, which contains 37 typical mitochondrial genes (13 protein-coding genes, 2 rRNAs and 22 tRNAs) and a 854 bp D-loop. Its gene arrangement pattern is identical with typical other cockroaches. All protein-coding gen...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799990/ https://www.ncbi.nlm.nih.gov/pubmed/33473575 http://dx.doi.org/10.1080/23802359.2016.1214545 |
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author | Liu, Gang Liu, Mengwei Hui, Wenyu Chen, Chuanqin Zhang, Yingyin |
author_facet | Liu, Gang Liu, Mengwei Hui, Wenyu Chen, Chuanqin Zhang, Yingyin |
author_sort | Liu, Gang |
collection | PubMed |
description | The complete mitochondrial genome of Polyphaga plancyi is a 15,547 bp circular molecule, which contains 37 typical mitochondrial genes (13 protein-coding genes, 2 rRNAs and 22 tRNAs) and a 854 bp D-loop. Its gene arrangement pattern is identical with typical other cockroaches. All protein-coding genes start with an ATG codon except COI, ND3, ND5, ND4, ND4L ND6 and ND1. TAA is the most frequent stop codon, and TAG, GCA, TA- and T- are also occurred very common. The mtDNA sequence contains 12S rRNA and 16S rRNA of rRNA. Except for tRNA(Ser(AGY)) and tRNA(Leu(CUN)) without the dihydrouridine (DHU) arm, all tRNAs could be folded into canonical cloverleaf secondary structures. The phylogenetic trees from the ML and BI analyses based on the complete mtDNA of nine cockroaches’ species, share similar topologies and high node support values. Polyphaga plancy has close relative with Eupolyphaga sinensis. |
format | Online Article Text |
id | pubmed-7799990 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77999902021-01-19 Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) Liu, Gang Liu, Mengwei Hui, Wenyu Chen, Chuanqin Zhang, Yingyin Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Polyphaga plancyi is a 15,547 bp circular molecule, which contains 37 typical mitochondrial genes (13 protein-coding genes, 2 rRNAs and 22 tRNAs) and a 854 bp D-loop. Its gene arrangement pattern is identical with typical other cockroaches. All protein-coding genes start with an ATG codon except COI, ND3, ND5, ND4, ND4L ND6 and ND1. TAA is the most frequent stop codon, and TAG, GCA, TA- and T- are also occurred very common. The mtDNA sequence contains 12S rRNA and 16S rRNA of rRNA. Except for tRNA(Ser(AGY)) and tRNA(Leu(CUN)) without the dihydrouridine (DHU) arm, all tRNAs could be folded into canonical cloverleaf secondary structures. The phylogenetic trees from the ML and BI analyses based on the complete mtDNA of nine cockroaches’ species, share similar topologies and high node support values. Polyphaga plancy has close relative with Eupolyphaga sinensis. Taylor & Francis 2016-09-08 /pmc/articles/PMC7799990/ /pubmed/33473575 http://dx.doi.org/10.1080/23802359.2016.1214545 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Liu, Gang Liu, Mengwei Hui, Wenyu Chen, Chuanqin Zhang, Yingyin Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) |
title | Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) |
title_full | Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) |
title_fullStr | Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) |
title_full_unstemmed | Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) |
title_short | Complete mitochondrial genome of Polyphaga plancyi (Blattaria: Polyphagidae) |
title_sort | complete mitochondrial genome of polyphaga plancyi (blattaria: polyphagidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799990/ https://www.ncbi.nlm.nih.gov/pubmed/33473575 http://dx.doi.org/10.1080/23802359.2016.1214545 |
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