Cargando…

The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis

In this study, we firstly determined the complete mitochondrial DNA sequence of the hybrid of Acanthopagrus schlegelii (♀)×Pagrus major (♂) using the next-generation sequencing and Polymerase Chain Reaction-based method (PCR). The total length of the hybrid mitochondrial genome was identical to the...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhu, Fei, Xue, Liangyi, Jia, Chaofeng, Zhang, Zhiyong, Chen, Shuyin, Zhang, Zhiwei, Meng, Qian, Sun, Ruijian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799999/
https://www.ncbi.nlm.nih.gov/pubmed/33474417
http://dx.doi.org/10.1080/23802359.2018.1501305
_version_ 1783635251992461312
author Zhu, Fei
Xue, Liangyi
Jia, Chaofeng
Zhang, Zhiyong
Chen, Shuyin
Zhang, Zhiwei
Meng, Qian
Sun, Ruijian
author_facet Zhu, Fei
Xue, Liangyi
Jia, Chaofeng
Zhang, Zhiyong
Chen, Shuyin
Zhang, Zhiwei
Meng, Qian
Sun, Ruijian
author_sort Zhu, Fei
collection PubMed
description In this study, we firstly determined the complete mitochondrial DNA sequence of the hybrid of Acanthopagrus schlegelii (♀)×Pagrus major (♂) using the next-generation sequencing and Polymerase Chain Reaction-based method (PCR). The total length of the hybrid mitochondrial genome was identical to the female parent as 16,649 bp in length, which contained 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and one displacement loop locus (a control region). The overall nucleotide composition is: 28.0%A, 27.9%T, 27.9%C, and 16.2%G, with a total A + T content of 45.9%. This study discovered the 99.8% sequence identity between the hybrid and its female parent, which confirmed the maternal inheritance pattern followed by the mitochondrial genome of the hybrid. The complete mitochondrial genome sequence of this hybrid sea bream may provide a valuable and useful resource for population genetic study and monitoring, and as well as for further conservation effort on this species.
format Online
Article
Text
id pubmed-7799999
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77999992021-01-19 The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis Zhu, Fei Xue, Liangyi Jia, Chaofeng Zhang, Zhiyong Chen, Shuyin Zhang, Zhiwei Meng, Qian Sun, Ruijian Mitochondrial DNA B Resour Mitogenome Announcement In this study, we firstly determined the complete mitochondrial DNA sequence of the hybrid of Acanthopagrus schlegelii (♀)×Pagrus major (♂) using the next-generation sequencing and Polymerase Chain Reaction-based method (PCR). The total length of the hybrid mitochondrial genome was identical to the female parent as 16,649 bp in length, which contained 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and one displacement loop locus (a control region). The overall nucleotide composition is: 28.0%A, 27.9%T, 27.9%C, and 16.2%G, with a total A + T content of 45.9%. This study discovered the 99.8% sequence identity between the hybrid and its female parent, which confirmed the maternal inheritance pattern followed by the mitochondrial genome of the hybrid. The complete mitochondrial genome sequence of this hybrid sea bream may provide a valuable and useful resource for population genetic study and monitoring, and as well as for further conservation effort on this species. Taylor & Francis 2018-10-25 /pmc/articles/PMC7799999/ /pubmed/33474417 http://dx.doi.org/10.1080/23802359.2018.1501305 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhu, Fei
Xue, Liangyi
Jia, Chaofeng
Zhang, Zhiyong
Chen, Shuyin
Zhang, Zhiwei
Meng, Qian
Sun, Ruijian
The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
title The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
title_full The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
title_fullStr The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
title_full_unstemmed The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
title_short The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
title_sort complete mitochondrial genome of the hybrid of acanthopagrus schlegelii (♀) × pagrus major (♂) with phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799999/
https://www.ncbi.nlm.nih.gov/pubmed/33474417
http://dx.doi.org/10.1080/23802359.2018.1501305
work_keys_str_mv AT zhufei thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT xueliangyi thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT jiachaofeng thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT zhangzhiyong thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT chenshuyin thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT zhangzhiwei thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT mengqian thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT sunruijian thecompletemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT zhufei completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT xueliangyi completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT jiachaofeng completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT zhangzhiyong completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT chenshuyin completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT zhangzhiwei completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT mengqian completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis
AT sunruijian completemitochondrialgenomeofthehybridofacanthopagrusschlegeliipagrusmajorwithphylogeneticanalysis