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The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis
In this study, we firstly determined the complete mitochondrial DNA sequence of the hybrid of Acanthopagrus schlegelii (♀)×Pagrus major (♂) using the next-generation sequencing and Polymerase Chain Reaction-based method (PCR). The total length of the hybrid mitochondrial genome was identical to the...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799999/ https://www.ncbi.nlm.nih.gov/pubmed/33474417 http://dx.doi.org/10.1080/23802359.2018.1501305 |
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author | Zhu, Fei Xue, Liangyi Jia, Chaofeng Zhang, Zhiyong Chen, Shuyin Zhang, Zhiwei Meng, Qian Sun, Ruijian |
author_facet | Zhu, Fei Xue, Liangyi Jia, Chaofeng Zhang, Zhiyong Chen, Shuyin Zhang, Zhiwei Meng, Qian Sun, Ruijian |
author_sort | Zhu, Fei |
collection | PubMed |
description | In this study, we firstly determined the complete mitochondrial DNA sequence of the hybrid of Acanthopagrus schlegelii (♀)×Pagrus major (♂) using the next-generation sequencing and Polymerase Chain Reaction-based method (PCR). The total length of the hybrid mitochondrial genome was identical to the female parent as 16,649 bp in length, which contained 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and one displacement loop locus (a control region). The overall nucleotide composition is: 28.0%A, 27.9%T, 27.9%C, and 16.2%G, with a total A + T content of 45.9%. This study discovered the 99.8% sequence identity between the hybrid and its female parent, which confirmed the maternal inheritance pattern followed by the mitochondrial genome of the hybrid. The complete mitochondrial genome sequence of this hybrid sea bream may provide a valuable and useful resource for population genetic study and monitoring, and as well as for further conservation effort on this species. |
format | Online Article Text |
id | pubmed-7799999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77999992021-01-19 The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis Zhu, Fei Xue, Liangyi Jia, Chaofeng Zhang, Zhiyong Chen, Shuyin Zhang, Zhiwei Meng, Qian Sun, Ruijian Mitochondrial DNA B Resour Mitogenome Announcement In this study, we firstly determined the complete mitochondrial DNA sequence of the hybrid of Acanthopagrus schlegelii (♀)×Pagrus major (♂) using the next-generation sequencing and Polymerase Chain Reaction-based method (PCR). The total length of the hybrid mitochondrial genome was identical to the female parent as 16,649 bp in length, which contained 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and one displacement loop locus (a control region). The overall nucleotide composition is: 28.0%A, 27.9%T, 27.9%C, and 16.2%G, with a total A + T content of 45.9%. This study discovered the 99.8% sequence identity between the hybrid and its female parent, which confirmed the maternal inheritance pattern followed by the mitochondrial genome of the hybrid. The complete mitochondrial genome sequence of this hybrid sea bream may provide a valuable and useful resource for population genetic study and monitoring, and as well as for further conservation effort on this species. Taylor & Francis 2018-10-25 /pmc/articles/PMC7799999/ /pubmed/33474417 http://dx.doi.org/10.1080/23802359.2018.1501305 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Zhu, Fei Xue, Liangyi Jia, Chaofeng Zhang, Zhiyong Chen, Shuyin Zhang, Zhiwei Meng, Qian Sun, Ruijian The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis |
title | The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis |
title_full | The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis |
title_fullStr | The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis |
title_full_unstemmed | The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis |
title_short | The complete mitochondrial genome of the hybrid of Acanthopagrus schlegelii (♀) × Pagrus major (♂) with phylogenetic analysis |
title_sort | complete mitochondrial genome of the hybrid of acanthopagrus schlegelii (♀) × pagrus major (♂) with phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799999/ https://www.ncbi.nlm.nih.gov/pubmed/33474417 http://dx.doi.org/10.1080/23802359.2018.1501305 |
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