The complete chloroplast genome sequence of potato wild relative species, Solanum nigrum

Solanum nigrum is a wild non-tuber-bearing species belonging to Solanaceae family. The complete chloroplast genome of S. nigrum was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. nigrum was 155,432 bp in length and consisted of 25,2...

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Detalles Bibliográficos
Autor principal: Park, Tae-Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800014/
https://www.ncbi.nlm.nih.gov/pubmed/33473656
http://dx.doi.org/10.1080/23802359.2016.1250133
Descripción
Sumario:Solanum nigrum is a wild non-tuber-bearing species belonging to Solanaceae family. The complete chloroplast genome of S. nigrum was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. nigrum was 155,432 bp in length and consisted of 25,289 bp of a pair of inverted repeats, 18,402 bp of small single copy, and 85,852 bp of large single copy regions. A total of 139 genes were annotated including 96 protein-coding genes, 39 tRNA genes, and four rRNA genes. Maximum likelihood phylogenetic analysis with 25 Solanaceae species revealed that S. nigrum is grouped with S. melongena.

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