Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)

In this study, we announce the complete chloroplast genome sequence of Nicotiana attenuata. The genome sequence of 155,941 bp consists of two inverted repeat (IRa and IRb) regions of 25,438 bp each, a large single-copy (LSC) region of 86,513 bp and a small single-copy (SSC) region of 18,524 bp. The...

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Autores principales: Poczai, Péter, Amiryousefi, Ali, Hyvönen, Jaakko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800028/
https://www.ncbi.nlm.nih.gov/pubmed/33473973
http://dx.doi.org/10.1080/23802359.2017.1398611
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author Poczai, Péter
Amiryousefi, Ali
Hyvönen, Jaakko
author_facet Poczai, Péter
Amiryousefi, Ali
Hyvönen, Jaakko
author_sort Poczai, Péter
collection PubMed
description In this study, we announce the complete chloroplast genome sequence of Nicotiana attenuata. The genome sequence of 155,941 bp consists of two inverted repeat (IRa and IRb) regions of 25,438 bp each, a large single-copy (LSC) region of 86,513 bp and a small single-copy (SSC) region of 18,524 bp. The overall GC content is 37.9% and the GC contents of LSC, IRs, and SSC are 36%, 43.2%, and 32.1%, respectively. The plastome with 129 annotated unique genes includes 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Using the whole chloroplast genome sequences alignment of 16 Solanaceae species a phylogenetic hypothesis is presented validating the position of N. attenuata within Nicotianeae.
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spelling pubmed-78000282021-01-19 Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae) Poczai, Péter Amiryousefi, Ali Hyvönen, Jaakko Mitochondrial DNA B Resour Mitogenome Announcement In this study, we announce the complete chloroplast genome sequence of Nicotiana attenuata. The genome sequence of 155,941 bp consists of two inverted repeat (IRa and IRb) regions of 25,438 bp each, a large single-copy (LSC) region of 86,513 bp and a small single-copy (SSC) region of 18,524 bp. The overall GC content is 37.9% and the GC contents of LSC, IRs, and SSC are 36%, 43.2%, and 32.1%, respectively. The plastome with 129 annotated unique genes includes 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Using the whole chloroplast genome sequences alignment of 16 Solanaceae species a phylogenetic hypothesis is presented validating the position of N. attenuata within Nicotianeae. Taylor & Francis 2017-11-06 /pmc/articles/PMC7800028/ /pubmed/33473973 http://dx.doi.org/10.1080/23802359.2017.1398611 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Poczai, Péter
Amiryousefi, Ali
Hyvönen, Jaakko
Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
title Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
title_full Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
title_fullStr Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
title_full_unstemmed Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
title_short Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
title_sort complete chloroplast genome sequence of coyote tobacco (nicotiana attenuata, solanaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800028/
https://www.ncbi.nlm.nih.gov/pubmed/33473973
http://dx.doi.org/10.1080/23802359.2017.1398611
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