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Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins

Leporinus elongatus is an important commercial fish found in the La Plata and Paraná River basins. Next-generation sequencing was used to sequence the mitochondrial DNA (mtDNA) of L. elongatus. The mtDNA was assembled using the CLC Workbench software v. 9.0 and subsequently aligned to other 10 compl...

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Autores principales: Bedore, Alessandra Gomes, Resende, Leonardo Cardoso, do Carmo, Anderson Oliveira, Nuñez Rodriguez, Daniela, Martins, Ana Paula Vimieiro, Kalapothakis, Evanguedes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800035/
https://www.ncbi.nlm.nih.gov/pubmed/33473792
http://dx.doi.org/10.1080/23802359.2017.1318685
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author Bedore, Alessandra Gomes
Resende, Leonardo Cardoso
do Carmo, Anderson Oliveira
Nuñez Rodriguez, Daniela
Martins, Ana Paula Vimieiro
Kalapothakis, Evanguedes
author_facet Bedore, Alessandra Gomes
Resende, Leonardo Cardoso
do Carmo, Anderson Oliveira
Nuñez Rodriguez, Daniela
Martins, Ana Paula Vimieiro
Kalapothakis, Evanguedes
author_sort Bedore, Alessandra Gomes
collection PubMed
description Leporinus elongatus is an important commercial fish found in the La Plata and Paraná River basins. Next-generation sequencing was used to sequence the mitochondrial DNA (mtDNA) of L. elongatus. The mtDNA was assembled using the CLC Workbench software v. 9.0 and subsequently aligned to other 10 complete fish mitochondrial sequences to enable phylogenetic analysis using MEGA 7.0. The complete mtDNA molecule had 16,784 bp and its GC content was 43%. The mtDNA structure was similar to that of other vertebrates: two ribosomal RNA, 22 transfer RNA, 13 protein-coding genes, and a D-loop region containing 1115 bp. Phylogenetic analysis yielded a tree with high bootstrap value that was coherent with the current phylogeny proposed for Characiformes.
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spelling pubmed-78000352021-01-19 Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins Bedore, Alessandra Gomes Resende, Leonardo Cardoso do Carmo, Anderson Oliveira Nuñez Rodriguez, Daniela Martins, Ana Paula Vimieiro Kalapothakis, Evanguedes Mitochondrial DNA B Resour Mitogenome Announcement Leporinus elongatus is an important commercial fish found in the La Plata and Paraná River basins. Next-generation sequencing was used to sequence the mitochondrial DNA (mtDNA) of L. elongatus. The mtDNA was assembled using the CLC Workbench software v. 9.0 and subsequently aligned to other 10 complete fish mitochondrial sequences to enable phylogenetic analysis using MEGA 7.0. The complete mtDNA molecule had 16,784 bp and its GC content was 43%. The mtDNA structure was similar to that of other vertebrates: two ribosomal RNA, 22 transfer RNA, 13 protein-coding genes, and a D-loop region containing 1115 bp. Phylogenetic analysis yielded a tree with high bootstrap value that was coherent with the current phylogeny proposed for Characiformes. Taylor & Francis 2017-05-09 /pmc/articles/PMC7800035/ /pubmed/33473792 http://dx.doi.org/10.1080/23802359.2017.1318685 Text en © 2017 Universidade Federal de Minas Gerais http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Bedore, Alessandra Gomes
Resende, Leonardo Cardoso
do Carmo, Anderson Oliveira
Nuñez Rodriguez, Daniela
Martins, Ana Paula Vimieiro
Kalapothakis, Evanguedes
Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins
title Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins
title_full Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins
title_fullStr Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins
title_full_unstemmed Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins
title_short Leporinus elongatus (Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins
title_sort leporinus elongatus (characiformes, anostomidae): complete mtdna sequence of an economically important fish from the paraná and la plata river basins
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800035/
https://www.ncbi.nlm.nih.gov/pubmed/33473792
http://dx.doi.org/10.1080/23802359.2017.1318685
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