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Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard (Neofelis nebulosa) has been sequenced using next generation sequencing technology Torrent (PGM) platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two r...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800050/ https://www.ncbi.nlm.nih.gov/pubmed/33473573 http://dx.doi.org/10.1080/23802359.2016.1214543 |
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author | Tabasum, Wajeeda Sreenivas, Ara Bheemavarapu, Kesav Kumar Golla, Tirupathi Rao Gaur, Ajay |
author_facet | Tabasum, Wajeeda Sreenivas, Ara Bheemavarapu, Kesav Kumar Golla, Tirupathi Rao Gaur, Ajay |
author_sort | Tabasum, Wajeeda |
collection | PubMed |
description | The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard (Neofelis nebulosa) has been sequenced using next generation sequencing technology Torrent (PGM) platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two rRNA genes and a control region (CR). The mitochondrial genome is relatively similar to other felid mitochondrial genomes with respect to gene arrangement, composition, tRNA structures and skews of AT/GC bases to be typical of those reported for other mammals. The nucleotide composition of the genome shows that there is more A–T% than G–C% on the positive strand as revealed by positive AT and CG skews. The base composition of the mitochondrial genome of clouded leopard is as follows: A, 5362 bp (31.8%); C, 4560bp (27.0%); G, 2475 bp (14.6%); T, 4462 bp (26.4%). Most of the genes have ATG initiation codons, except ND1, ND2, ND3, ND4, ND6, and CYTB (ATA start codon). |
format | Online Article Text |
id | pubmed-7800050 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78000502021-01-19 Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) Tabasum, Wajeeda Sreenivas, Ara Bheemavarapu, Kesav Kumar Golla, Tirupathi Rao Gaur, Ajay Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard (Neofelis nebulosa) has been sequenced using next generation sequencing technology Torrent (PGM) platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two rRNA genes and a control region (CR). The mitochondrial genome is relatively similar to other felid mitochondrial genomes with respect to gene arrangement, composition, tRNA structures and skews of AT/GC bases to be typical of those reported for other mammals. The nucleotide composition of the genome shows that there is more A–T% than G–C% on the positive strand as revealed by positive AT and CG skews. The base composition of the mitochondrial genome of clouded leopard is as follows: A, 5362 bp (31.8%); C, 4560bp (27.0%); G, 2475 bp (14.6%); T, 4462 bp (26.4%). Most of the genes have ATG initiation codons, except ND1, ND2, ND3, ND4, ND6, and CYTB (ATA start codon). Taylor & Francis 2016-09-05 /pmc/articles/PMC7800050/ /pubmed/33473573 http://dx.doi.org/10.1080/23802359.2016.1214543 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Tabasum, Wajeeda Sreenivas, Ara Bheemavarapu, Kesav Kumar Golla, Tirupathi Rao Gaur, Ajay Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) |
title | Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) |
title_full | Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) |
title_fullStr | Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) |
title_full_unstemmed | Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) |
title_short | Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) |
title_sort | complete mitochondrial genome sequence of the indian clouded leopard (neofelis nebulosa) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800050/ https://www.ncbi.nlm.nih.gov/pubmed/33473573 http://dx.doi.org/10.1080/23802359.2016.1214543 |
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