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Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)

The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard (Neofelis nebulosa) has been sequenced using next generation sequencing technology Torrent (PGM) platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two r...

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Autores principales: Tabasum, Wajeeda, Sreenivas, Ara, Bheemavarapu, Kesav Kumar, Golla, Tirupathi Rao, Gaur, Ajay
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800050/
https://www.ncbi.nlm.nih.gov/pubmed/33473573
http://dx.doi.org/10.1080/23802359.2016.1214543
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author Tabasum, Wajeeda
Sreenivas, Ara
Bheemavarapu, Kesav Kumar
Golla, Tirupathi Rao
Gaur, Ajay
author_facet Tabasum, Wajeeda
Sreenivas, Ara
Bheemavarapu, Kesav Kumar
Golla, Tirupathi Rao
Gaur, Ajay
author_sort Tabasum, Wajeeda
collection PubMed
description The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard (Neofelis nebulosa) has been sequenced using next generation sequencing technology Torrent (PGM) platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two rRNA genes and a control region (CR). The mitochondrial genome is relatively similar to other felid mitochondrial genomes with respect to gene arrangement, composition, tRNA structures and skews of AT/GC bases to be typical of those reported for other mammals. The nucleotide composition of the genome shows that there is more A–T% than G–C% on the positive strand as revealed by positive AT and CG skews. The base composition of the mitochondrial genome of clouded leopard is as follows: A, 5362 bp (31.8%); C, 4560bp (27.0%); G, 2475 bp (14.6%); T, 4462 bp (26.4%). Most of the genes have ATG initiation codons, except ND1, ND2, ND3, ND4, ND6, and CYTB (ATA start codon).
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spelling pubmed-78000502021-01-19 Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa) Tabasum, Wajeeda Sreenivas, Ara Bheemavarapu, Kesav Kumar Golla, Tirupathi Rao Gaur, Ajay Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard (Neofelis nebulosa) has been sequenced using next generation sequencing technology Torrent (PGM) platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two rRNA genes and a control region (CR). The mitochondrial genome is relatively similar to other felid mitochondrial genomes with respect to gene arrangement, composition, tRNA structures and skews of AT/GC bases to be typical of those reported for other mammals. The nucleotide composition of the genome shows that there is more A–T% than G–C% on the positive strand as revealed by positive AT and CG skews. The base composition of the mitochondrial genome of clouded leopard is as follows: A, 5362 bp (31.8%); C, 4560bp (27.0%); G, 2475 bp (14.6%); T, 4462 bp (26.4%). Most of the genes have ATG initiation codons, except ND1, ND2, ND3, ND4, ND6, and CYTB (ATA start codon). Taylor & Francis 2016-09-05 /pmc/articles/PMC7800050/ /pubmed/33473573 http://dx.doi.org/10.1080/23802359.2016.1214543 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Tabasum, Wajeeda
Sreenivas, Ara
Bheemavarapu, Kesav Kumar
Golla, Tirupathi Rao
Gaur, Ajay
Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
title Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
title_full Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
title_fullStr Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
title_full_unstemmed Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
title_short Complete mitochondrial genome sequence of the Indian clouded leopard (Neofelis nebulosa)
title_sort complete mitochondrial genome sequence of the indian clouded leopard (neofelis nebulosa)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800050/
https://www.ncbi.nlm.nih.gov/pubmed/33473573
http://dx.doi.org/10.1080/23802359.2016.1214543
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