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The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis

Here, we report the complete mitochondrial genome sequence of Alaska Pollock, Gadus chalcogramma. The genome sequence was obtained via long PCR reactions using universal primer sets for the fish mitochondrial genome. The total length of mitochondrial genome was 16,571 bp, consisting of 13 protein-co...

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Autores principales: Sim, Han-Kyeol, Yu, Jeong-Nam, Jin, Deuk-Hee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800057/
https://www.ncbi.nlm.nih.gov/pubmed/33474203
http://dx.doi.org/10.1080/23802359.2018.1462118
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author Sim, Han-Kyeol
Yu, Jeong-Nam
Jin, Deuk-Hee
author_facet Sim, Han-Kyeol
Yu, Jeong-Nam
Jin, Deuk-Hee
author_sort Sim, Han-Kyeol
collection PubMed
description Here, we report the complete mitochondrial genome sequence of Alaska Pollock, Gadus chalcogramma. The genome sequence was obtained via long PCR reactions using universal primer sets for the fish mitochondrial genome. The total length of mitochondrial genome was 16,571 bp, consisting of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and one control region (D-loop). Except for ND6 and eight tRNA genes, all of the other mitochondrial genes were encoded on the heavy strand. The NJ tree of the combined 13 protein-coding gene sequences of Gadus chalcogramma possesses a relatively closer relationship with the Okhotsk Sea Pollock (Gadus chalcogrammus). Our complete mitochondrial genome will be valuable resources for phylogeny, genetics, and conservation of the Gadus chalcogramma in Korea.
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spelling pubmed-78000572021-01-19 The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis Sim, Han-Kyeol Yu, Jeong-Nam Jin, Deuk-Hee Mitochondrial DNA B Resour Mitogenome Announcement Here, we report the complete mitochondrial genome sequence of Alaska Pollock, Gadus chalcogramma. The genome sequence was obtained via long PCR reactions using universal primer sets for the fish mitochondrial genome. The total length of mitochondrial genome was 16,571 bp, consisting of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and one control region (D-loop). Except for ND6 and eight tRNA genes, all of the other mitochondrial genes were encoded on the heavy strand. The NJ tree of the combined 13 protein-coding gene sequences of Gadus chalcogramma possesses a relatively closer relationship with the Okhotsk Sea Pollock (Gadus chalcogrammus). Our complete mitochondrial genome will be valuable resources for phylogeny, genetics, and conservation of the Gadus chalcogramma in Korea. Taylor & Francis 2018-04-12 /pmc/articles/PMC7800057/ /pubmed/33474203 http://dx.doi.org/10.1080/23802359.2018.1462118 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Sim, Han-Kyeol
Yu, Jeong-Nam
Jin, Deuk-Hee
The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
title The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
title_full The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
title_fullStr The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
title_full_unstemmed The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
title_short The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
title_sort complete mitochondrial genome of gadus chalcogramma and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800057/
https://www.ncbi.nlm.nih.gov/pubmed/33474203
http://dx.doi.org/10.1080/23802359.2018.1462118
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