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Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
The first complete chloroplast genome sequences of Korean endemic basswood in Ulleung Island, Tilia insularis, were reported in this study. The T. insularis plastome was 162,565 bp long, with the large single-copy (LSC) region of 91,100 bp, the small single-copy (SSC) region of 20,381 bp, and two in...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800074/ https://www.ncbi.nlm.nih.gov/pubmed/33474259 http://dx.doi.org/10.1080/23802359.2018.1473731 |
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author | Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul |
author_facet | Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul |
author_sort | Yang, Ji Young |
collection | PubMed |
description | The first complete chloroplast genome sequences of Korean endemic basswood in Ulleung Island, Tilia insularis, were reported in this study. The T. insularis plastome was 162,565 bp long, with the large single-copy (LSC) region of 91,100 bp, the small single-copy (SSC) region of 20,381 bp, and two inverted repeat (IR) regions of 25,542 bp. The plastome contained 131 genes, including 86 protein-coding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.5%. Phylogenetic analysis of 14 representative plastomes within the family Malvaceae suggests that T. insularis is closely related to other congeneric species in subfamily Tilioideae. |
format | Online Article Text |
id | pubmed-7800074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78000742021-01-19 Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Korean endemic basswood in Ulleung Island, Tilia insularis, were reported in this study. The T. insularis plastome was 162,565 bp long, with the large single-copy (LSC) region of 91,100 bp, the small single-copy (SSC) region of 20,381 bp, and two inverted repeat (IR) regions of 25,542 bp. The plastome contained 131 genes, including 86 protein-coding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.5%. Phylogenetic analysis of 14 representative plastomes within the family Malvaceae suggests that T. insularis is closely related to other congeneric species in subfamily Tilioideae. Taylor & Francis 2018-05-18 /pmc/articles/PMC7800074/ /pubmed/33474259 http://dx.doi.org/10.1080/23802359.2018.1473731 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea |
title | Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea |
title_full | Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea |
title_fullStr | Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea |
title_full_unstemmed | Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea |
title_short | Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea |
title_sort | complete chloroplast genome of ulleung island endemic basswood, tilia insularis (malvaceae), in korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800074/ https://www.ncbi.nlm.nih.gov/pubmed/33474259 http://dx.doi.org/10.1080/23802359.2018.1473731 |
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