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Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea

The first complete chloroplast genome sequences of Korean endemic basswood in Ulleung Island, Tilia insularis, were reported in this study. The T. insularis plastome was 162,565 bp long, with the large single-copy (LSC) region of 91,100 bp, the small single-copy (SSC) region of 20,381 bp, and two in...

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Autores principales: Yang, Ji Young, Lee, Woong, Pak, Jae-Hong, Kim, Seung-Chul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800074/
https://www.ncbi.nlm.nih.gov/pubmed/33474259
http://dx.doi.org/10.1080/23802359.2018.1473731
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author Yang, Ji Young
Lee, Woong
Pak, Jae-Hong
Kim, Seung-Chul
author_facet Yang, Ji Young
Lee, Woong
Pak, Jae-Hong
Kim, Seung-Chul
author_sort Yang, Ji Young
collection PubMed
description The first complete chloroplast genome sequences of Korean endemic basswood in Ulleung Island, Tilia insularis, were reported in this study. The T. insularis plastome was 162,565 bp long, with the large single-copy (LSC) region of 91,100 bp, the small single-copy (SSC) region of 20,381 bp, and two inverted repeat (IR) regions of 25,542 bp. The plastome contained 131 genes, including 86 protein-coding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.5%. Phylogenetic analysis of 14 representative plastomes within the family Malvaceae suggests that T. insularis is closely related to other congeneric species in subfamily Tilioideae.
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spelling pubmed-78000742021-01-19 Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea Yang, Ji Young Lee, Woong Pak, Jae-Hong Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Korean endemic basswood in Ulleung Island, Tilia insularis, were reported in this study. The T. insularis plastome was 162,565 bp long, with the large single-copy (LSC) region of 91,100 bp, the small single-copy (SSC) region of 20,381 bp, and two inverted repeat (IR) regions of 25,542 bp. The plastome contained 131 genes, including 86 protein-coding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.5%. Phylogenetic analysis of 14 representative plastomes within the family Malvaceae suggests that T. insularis is closely related to other congeneric species in subfamily Tilioideae. Taylor & Francis 2018-05-18 /pmc/articles/PMC7800074/ /pubmed/33474259 http://dx.doi.org/10.1080/23802359.2018.1473731 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Ji Young
Lee, Woong
Pak, Jae-Hong
Kim, Seung-Chul
Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
title Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
title_full Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
title_fullStr Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
title_full_unstemmed Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
title_short Complete chloroplast genome of Ulleung Island endemic basswood, Tilia insularis (Malvaceae), in Korea
title_sort complete chloroplast genome of ulleung island endemic basswood, tilia insularis (malvaceae), in korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800074/
https://www.ncbi.nlm.nih.gov/pubmed/33474259
http://dx.doi.org/10.1080/23802359.2018.1473731
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