Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)

In this study, the complete mitogenome of the blackmouth croaker Atrobucca nibe was obtained. Its mitogenome is 16,842 bp in length, consisting of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.2% A; 31.2% C; 16.4% G and...

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Autores principales: Yang, Wei-Di, Guo, Chang-Chang, Liu, Min, Lin, Baian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800086/
https://www.ncbi.nlm.nih.gov/pubmed/33474192
http://dx.doi.org/10.1080/23802359.2018.1456368
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author Yang, Wei-Di
Guo, Chang-Chang
Liu, Min
Lin, Baian
author_facet Yang, Wei-Di
Guo, Chang-Chang
Liu, Min
Lin, Baian
author_sort Yang, Wei-Di
collection PubMed
description In this study, the complete mitogenome of the blackmouth croaker Atrobucca nibe was obtained. Its mitogenome is 16,842 bp in length, consisting of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.2% A; 31.2% C; 16.4% G and 25.2% T. Sizes of the 22 tRNA genes range from 66 to 74 bp. One start codons (ATG) and three stop codons (TAG, AGA, and TAA/TA/T) were detected in 13 protein-coding genes. In the Bayesian tree based on the complete mitogenomes of 20 species (including A. nibe) from the family Sciaenidae, all nodes were strongly supported. The result suggested that A. nibe was subsequent to the group with genera Otolithes, Chrysochir, Megalonibea, Pennahia, Nibea, Dendrophysa, and Johnius.
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spelling pubmed-78000862021-01-19 Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae) Yang, Wei-Di Guo, Chang-Chang Liu, Min Lin, Baian Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitogenome of the blackmouth croaker Atrobucca nibe was obtained. Its mitogenome is 16,842 bp in length, consisting of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.2% A; 31.2% C; 16.4% G and 25.2% T. Sizes of the 22 tRNA genes range from 66 to 74 bp. One start codons (ATG) and three stop codons (TAG, AGA, and TAA/TA/T) were detected in 13 protein-coding genes. In the Bayesian tree based on the complete mitogenomes of 20 species (including A. nibe) from the family Sciaenidae, all nodes were strongly supported. The result suggested that A. nibe was subsequent to the group with genera Otolithes, Chrysochir, Megalonibea, Pennahia, Nibea, Dendrophysa, and Johnius. Taylor & Francis 2018-04-01 /pmc/articles/PMC7800086/ /pubmed/33474192 http://dx.doi.org/10.1080/23802359.2018.1456368 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Wei-Di
Guo, Chang-Chang
Liu, Min
Lin, Baian
Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)
title Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)
title_full Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)
title_fullStr Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)
title_full_unstemmed Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)
title_short Complete mitochondrial genome and the phylogenetic position of the blackmouth croaker Atrobucca nibe (Perciformes: Sciaenidae)
title_sort complete mitochondrial genome and the phylogenetic position of the blackmouth croaker atrobucca nibe (perciformes: sciaenidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800086/
https://www.ncbi.nlm.nih.gov/pubmed/33474192
http://dx.doi.org/10.1080/23802359.2018.1456368
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