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Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae)
Hoya is the largest genus (about 350–450 species) within Apocynaceae. It is a subshrub or liana, epiphytic or epilithic. Most species grow in tropical and subtropical South and Southeast Asia. Here we report and characterize the complete plastid genome sequence of Hoya pottsii Traill and Hoya liangi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800117/ https://www.ncbi.nlm.nih.gov/pubmed/33474456 http://dx.doi.org/10.1080/23802359.2018.1524720 |
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author | Tan, Xin-Hang Wang, Jian-Hua Zhao, Kun-Kun Zhu, Zhi-Xin Wang, Hua-Feng |
author_facet | Tan, Xin-Hang Wang, Jian-Hua Zhao, Kun-Kun Zhu, Zhi-Xin Wang, Hua-Feng |
author_sort | Tan, Xin-Hang |
collection | PubMed |
description | Hoya is the largest genus (about 350–450 species) within Apocynaceae. It is a subshrub or liana, epiphytic or epilithic. Most species grow in tropical and subtropical South and Southeast Asia. Here we report and characterize the complete plastid genome sequence of Hoya pottsii Traill and Hoya liangii Tsiang in an effort to provide genomic resources useful for promoting its systematics research. The complete plastome of H. pottsii is 161,565 bp in length, including two Inverted Repeat (IR) regions of 24,657 bp, a Large Single-Copy (LSC) region of 92,532 bp, and a Small Single-Copy (SSC) region of 19,719 bp. The plastome contains 115 genes, consisting of 81 unique protein-coding genes, 30 unique tRNA genes, and 4 unique rRNA genes. The overall A/T content in the plastome of H. pottsii is 62.40%. The complete plastome of H. liangii is 162,989 bp in length, including two IR regions of 24,841 bp, a LSC region of 93,292 bp, and a SSC region of 20,015 bp. The plastome contains 115 genes, consisting of 81 unique protein-coding genes, 30 unique tRNA genes, and 4 unique rRNA genes. The overall A/T content in the plastome of H. pottsii is 62.30%. The complete plastome sequence of H. pottsii and H. liangii will provide a useful resource for the conservation genetics of the two species as well as for the phylogenetic studies of Hoya. |
format | Online Article Text |
id | pubmed-7800117 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78001172021-01-19 Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) Tan, Xin-Hang Wang, Jian-Hua Zhao, Kun-Kun Zhu, Zhi-Xin Wang, Hua-Feng Mitochondrial DNA B Resour Mitogenome Announcement Hoya is the largest genus (about 350–450 species) within Apocynaceae. It is a subshrub or liana, epiphytic or epilithic. Most species grow in tropical and subtropical South and Southeast Asia. Here we report and characterize the complete plastid genome sequence of Hoya pottsii Traill and Hoya liangii Tsiang in an effort to provide genomic resources useful for promoting its systematics research. The complete plastome of H. pottsii is 161,565 bp in length, including two Inverted Repeat (IR) regions of 24,657 bp, a Large Single-Copy (LSC) region of 92,532 bp, and a Small Single-Copy (SSC) region of 19,719 bp. The plastome contains 115 genes, consisting of 81 unique protein-coding genes, 30 unique tRNA genes, and 4 unique rRNA genes. The overall A/T content in the plastome of H. pottsii is 62.40%. The complete plastome of H. liangii is 162,989 bp in length, including two IR regions of 24,841 bp, a LSC region of 93,292 bp, and a SSC region of 20,015 bp. The plastome contains 115 genes, consisting of 81 unique protein-coding genes, 30 unique tRNA genes, and 4 unique rRNA genes. The overall A/T content in the plastome of H. pottsii is 62.30%. The complete plastome sequence of H. pottsii and H. liangii will provide a useful resource for the conservation genetics of the two species as well as for the phylogenetic studies of Hoya. Taylor & Francis 2018-10-26 /pmc/articles/PMC7800117/ /pubmed/33474456 http://dx.doi.org/10.1080/23802359.2018.1524720 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Tan, Xin-Hang Wang, Jian-Hua Zhao, Kun-Kun Zhu, Zhi-Xin Wang, Hua-Feng Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) |
title | Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) |
title_full | Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) |
title_fullStr | Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) |
title_full_unstemmed | Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) |
title_short | Complete plastome sequence of Hoya pottsii Traill and Hoya liangii Tsiang (Apocynaceae) |
title_sort | complete plastome sequence of hoya pottsii traill and hoya liangii tsiang (apocynaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800117/ https://www.ncbi.nlm.nih.gov/pubmed/33474456 http://dx.doi.org/10.1080/23802359.2018.1524720 |
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