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The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)

In this study, the complete mitogenome sequence of Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae), has been sequenced by next-generation sequencing method. The overall base composition of Galaxea fascicularis mitogenome is 24.9% for A, 14.0% for C, 24.3% for G and 36.8% for T and has low...

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Autores principales: Niu, Wentao, Huang, Hui, Lin, Rongcheng, Chen, Ching-Hung, Shen, Kang-Ning, Hsiao, Chung-Der
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800161/
https://www.ncbi.nlm.nih.gov/pubmed/33473388
http://dx.doi.org/10.1080/23802359.2015.1137796
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author Niu, Wentao
Huang, Hui
Lin, Rongcheng
Chen, Ching-Hung
Shen, Kang-Ning
Hsiao, Chung-Der
author_facet Niu, Wentao
Huang, Hui
Lin, Rongcheng
Chen, Ching-Hung
Shen, Kang-Ning
Hsiao, Chung-Der
author_sort Niu, Wentao
collection PubMed
description In this study, the complete mitogenome sequence of Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae), has been sequenced by next-generation sequencing method. The overall base composition of Galaxea fascicularis mitogenome is 24.9% for A, 14.0% for C, 24.3% for G and 36.8% for T and has low GC content of 38.3%. The assembled mitogenome, consisting of 18 751 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs and two ribosomal RNAs genes. The G. fascicularis mitogenome has the common mitogenome gene organization and feature of scleractinian coral. Among 13 PCGs, ND5 gene is interrupted by group I intron (12 022 bp). There are 12 genes embedded in ND5 group I intron (tRNA-Leu, ND1, CYTB, ND2, ND6, ATP6, ND4, 12S rRNA, COX3, COX2, ND4L and ND3). The complete mitogenome provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony coral.
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spelling pubmed-78001612021-01-19 The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae) Niu, Wentao Huang, Hui Lin, Rongcheng Chen, Ching-Hung Shen, Kang-Ning Hsiao, Chung-Der Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitogenome sequence of Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae), has been sequenced by next-generation sequencing method. The overall base composition of Galaxea fascicularis mitogenome is 24.9% for A, 14.0% for C, 24.3% for G and 36.8% for T and has low GC content of 38.3%. The assembled mitogenome, consisting of 18 751 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs and two ribosomal RNAs genes. The G. fascicularis mitogenome has the common mitogenome gene organization and feature of scleractinian coral. Among 13 PCGs, ND5 gene is interrupted by group I intron (12 022 bp). There are 12 genes embedded in ND5 group I intron (tRNA-Leu, ND1, CYTB, ND2, ND6, ATP6, ND4, 12S rRNA, COX3, COX2, ND4L and ND3). The complete mitogenome provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony coral. Taylor & Francis 2016-02-01 /pmc/articles/PMC7800161/ /pubmed/33473388 http://dx.doi.org/10.1080/23802359.2015.1137796 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Niu, Wentao
Huang, Hui
Lin, Rongcheng
Chen, Ching-Hung
Shen, Kang-Ning
Hsiao, Chung-Der
The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)
title The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)
title_full The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)
title_fullStr The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)
title_full_unstemmed The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)
title_short The complete mitogenome of the Galaxy Coral, Galaxea fascicularis (Cnidaria: Oculinidae)
title_sort complete mitogenome of the galaxy coral, galaxea fascicularis (cnidaria: oculinidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800161/
https://www.ncbi.nlm.nih.gov/pubmed/33473388
http://dx.doi.org/10.1080/23802359.2015.1137796
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