Cargando…

The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species

Magnoliaceae are both economically and ornamentally important trees. Despite extensive studies in this family, the taxonomy of Michelia L. remains unclear, as well as the taxonomical status of Michelia alba. Herein, we report the complete chloroplast genome of M. alba DC. The chloroplast genome was...

Descripción completa

Detalles Bibliográficos
Autores principales: Hinsinger, Damien Daniel, Strijk, Joeri Sergej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800174/
https://www.ncbi.nlm.nih.gov/pubmed/33473697
http://dx.doi.org/10.1080/23802359.2016.1275850
_version_ 1783635292086861824
author Hinsinger, Damien Daniel
Strijk, Joeri Sergej
author_facet Hinsinger, Damien Daniel
Strijk, Joeri Sergej
author_sort Hinsinger, Damien Daniel
collection PubMed
description Magnoliaceae are both economically and ornamentally important trees. Despite extensive studies in this family, the taxonomy of Michelia L. remains unclear, as well as the taxonomical status of Michelia alba. Herein, we report the complete chloroplast genome of M. alba DC. The chloroplast genome was 159,789 bp in length, with a large single-copy (LSC) region of 87,951 bp and a small single-copy (SSC) region of 18,798 bp, separated by two inverted repeat (IRs) regions of 26,570 bp. It contained 156 genes, including 83 coding genes, 68 tRNA genes, and 8 rRNA genes. The overall GC content was 39.3%, and 43.2%, 38.0%, 34.3%, in the IRs, LSC, and SSC regions, respectively. A phylogenetic analysis showed that M. alba is closely related to M. odora, with the genus Michelia nested inside Magnolia.
format Online
Article
Text
id pubmed-7800174
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78001742021-01-19 The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species Hinsinger, Damien Daniel Strijk, Joeri Sergej Mitochondrial DNA B Resour Mitogenome Announcement Magnoliaceae are both economically and ornamentally important trees. Despite extensive studies in this family, the taxonomy of Michelia L. remains unclear, as well as the taxonomical status of Michelia alba. Herein, we report the complete chloroplast genome of M. alba DC. The chloroplast genome was 159,789 bp in length, with a large single-copy (LSC) region of 87,951 bp and a small single-copy (SSC) region of 18,798 bp, separated by two inverted repeat (IRs) regions of 26,570 bp. It contained 156 genes, including 83 coding genes, 68 tRNA genes, and 8 rRNA genes. The overall GC content was 39.3%, and 43.2%, 38.0%, 34.3%, in the IRs, LSC, and SSC regions, respectively. A phylogenetic analysis showed that M. alba is closely related to M. odora, with the genus Michelia nested inside Magnolia. Taylor & Francis 2017-01-05 /pmc/articles/PMC7800174/ /pubmed/33473697 http://dx.doi.org/10.1080/23802359.2016.1275850 Text en © 2017 Guangxi University. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Hinsinger, Damien Daniel
Strijk, Joeri Sergej
The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species
title The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species
title_full The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species
title_fullStr The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species
title_full_unstemmed The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species
title_short The chloroplast genome sequence of Michelia alba (Magnoliaceae), an ornamental tree species
title_sort chloroplast genome sequence of michelia alba (magnoliaceae), an ornamental tree species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800174/
https://www.ncbi.nlm.nih.gov/pubmed/33473697
http://dx.doi.org/10.1080/23802359.2016.1275850
work_keys_str_mv AT hinsingerdamiendaniel thechloroplastgenomesequenceofmicheliaalbamagnoliaceaeanornamentaltreespecies
AT strijkjoerisergej thechloroplastgenomesequenceofmicheliaalbamagnoliaceaeanornamentaltreespecies
AT hinsingerdamiendaniel chloroplastgenomesequenceofmicheliaalbamagnoliaceaeanornamentaltreespecies
AT strijkjoerisergej chloroplastgenomesequenceofmicheliaalbamagnoliaceaeanornamentaltreespecies