The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China

ABSTRACT Fritillaria yuminensis is a medicinal species endemic to northwest Xinjiang, China. The complete chloroplast genome sequence of F. yuminensis was sequenced by Illumina Hiseq platform. The complete cp genome was 151,813 bp in length, containing a pair of inverted repeats (IRa and IRb) of 26,...

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Autores principales: Li, Yan, Zhang, Zhirong, Lv, Guanghui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800183/
https://www.ncbi.nlm.nih.gov/pubmed/33474033
http://dx.doi.org/10.1080/23802359.2017.1413315
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author Li, Yan
Zhang, Zhirong
Lv, Guanghui
author_facet Li, Yan
Zhang, Zhirong
Lv, Guanghui
author_sort Li, Yan
collection PubMed
description ABSTRACT Fritillaria yuminensis is a medicinal species endemic to northwest Xinjiang, China. The complete chloroplast genome sequence of F. yuminensis was sequenced by Illumina Hiseq platform. The complete cp genome was 151,813 bp in length, containing a pair of inverted repeats (IRa and IRb) of 26,377 bp, a large single copy (LSC) of 81,533 bp and a small single copy (SSC) of 17,526 bp, respectively. The overall GC contents was 36.9%. A total of 114 genes were annotated, including 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes. A maximum-likelihood phylogenetic analysis indicated that F. yuminensis was closely related to F. tortifolia and F. verticillata.
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spelling pubmed-78001832021-01-19 The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China Li, Yan Zhang, Zhirong Lv, Guanghui Mitochondrial DNA B Resour Mitogenome Announcement ABSTRACT Fritillaria yuminensis is a medicinal species endemic to northwest Xinjiang, China. The complete chloroplast genome sequence of F. yuminensis was sequenced by Illumina Hiseq platform. The complete cp genome was 151,813 bp in length, containing a pair of inverted repeats (IRa and IRb) of 26,377 bp, a large single copy (LSC) of 81,533 bp and a small single copy (SSC) of 17,526 bp, respectively. The overall GC contents was 36.9%. A total of 114 genes were annotated, including 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes. A maximum-likelihood phylogenetic analysis indicated that F. yuminensis was closely related to F. tortifolia and F. verticillata. Taylor & Francis 2017-12-07 /pmc/articles/PMC7800183/ /pubmed/33474033 http://dx.doi.org/10.1080/23802359.2017.1413315 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Yan
Zhang, Zhirong
Lv, Guanghui
The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
title The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
title_full The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
title_fullStr The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
title_full_unstemmed The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
title_short The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
title_sort complete chloroplast genome of fritillaria yuminensis, a rare and endangered species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800183/
https://www.ncbi.nlm.nih.gov/pubmed/33474033
http://dx.doi.org/10.1080/23802359.2017.1413315
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