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The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
Artemisia selengensis Turcz (Louhao in Chinese) is a widely used health food and a well-known traditional Chinese medicine. However, only a small part of the chloroplast genome data of Artemisia has been reported and there was no report for A. selengensis. In this study, we presented the complete ch...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800199/ https://www.ncbi.nlm.nih.gov/pubmed/33474361 http://dx.doi.org/10.1080/23802359.2018.1501322 |
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author | Peng, Jiao Zhao, Yunlin Li, Chaoyang Xu, Zhenggang |
author_facet | Peng, Jiao Zhao, Yunlin Li, Chaoyang Xu, Zhenggang |
author_sort | Peng, Jiao |
collection | PubMed |
description | Artemisia selengensis Turcz (Louhao in Chinese) is a widely used health food and a well-known traditional Chinese medicine. However, only a small part of the chloroplast genome data of Artemisia has been reported and there was no report for A. selengensis. In this study, we presented the complete chloroplast genome of A. selengensis and analysed its phylogenetic relationship with other 28 related species belonging to the Asteraceae family. The result showed that the whole genome was 151 215 bp in length with a typical conserved quadripartite structure. The total GC content of whole genome, LSC, SSC, and IRa/IRb regions was 37.46, 35.55, 30.81, and 43.09%, respectively. A total of 133 genes were identified, including 88 protein-coding, 37 transfer RNA, and eight ribosome RNA genes. Among these genes, nineteen genes contained a single intron and two genes contained two introns. The phylogenetic relationship showed that A. selengensis was similar to A. gmelinii. The complete chloroplast genome presented here will enrich the genetic resources of medicinal plant and promote our understanding of the phylogeny of Artemisia within the Asteraceae family. |
format | Online Article Text |
id | pubmed-7800199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78001992021-01-19 The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake Peng, Jiao Zhao, Yunlin Li, Chaoyang Xu, Zhenggang Mitochondrial DNA B Resour Mitogenome Announcement Artemisia selengensis Turcz (Louhao in Chinese) is a widely used health food and a well-known traditional Chinese medicine. However, only a small part of the chloroplast genome data of Artemisia has been reported and there was no report for A. selengensis. In this study, we presented the complete chloroplast genome of A. selengensis and analysed its phylogenetic relationship with other 28 related species belonging to the Asteraceae family. The result showed that the whole genome was 151 215 bp in length with a typical conserved quadripartite structure. The total GC content of whole genome, LSC, SSC, and IRa/IRb regions was 37.46, 35.55, 30.81, and 43.09%, respectively. A total of 133 genes were identified, including 88 protein-coding, 37 transfer RNA, and eight ribosome RNA genes. Among these genes, nineteen genes contained a single intron and two genes contained two introns. The phylogenetic relationship showed that A. selengensis was similar to A. gmelinii. The complete chloroplast genome presented here will enrich the genetic resources of medicinal plant and promote our understanding of the phylogeny of Artemisia within the Asteraceae family. Taylor & Francis 2018-08-17 /pmc/articles/PMC7800199/ /pubmed/33474361 http://dx.doi.org/10.1080/23802359.2018.1501322 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Peng, Jiao Zhao, Yunlin Li, Chaoyang Xu, Zhenggang The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake |
title | The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake |
title_full | The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake |
title_fullStr | The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake |
title_full_unstemmed | The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake |
title_short | The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake |
title_sort | complete chloroplast genome and phylogeny of artemisia selengensis in dongting lake |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800199/ https://www.ncbi.nlm.nih.gov/pubmed/33474361 http://dx.doi.org/10.1080/23802359.2018.1501322 |
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