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The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake

Artemisia selengensis Turcz (Louhao in Chinese) is a widely used health food and a well-known traditional Chinese medicine. However, only a small part of the chloroplast genome data of Artemisia has been reported and there was no report for A. selengensis. In this study, we presented the complete ch...

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Autores principales: Peng, Jiao, Zhao, Yunlin, Li, Chaoyang, Xu, Zhenggang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800199/
https://www.ncbi.nlm.nih.gov/pubmed/33474361
http://dx.doi.org/10.1080/23802359.2018.1501322
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author Peng, Jiao
Zhao, Yunlin
Li, Chaoyang
Xu, Zhenggang
author_facet Peng, Jiao
Zhao, Yunlin
Li, Chaoyang
Xu, Zhenggang
author_sort Peng, Jiao
collection PubMed
description Artemisia selengensis Turcz (Louhao in Chinese) is a widely used health food and a well-known traditional Chinese medicine. However, only a small part of the chloroplast genome data of Artemisia has been reported and there was no report for A. selengensis. In this study, we presented the complete chloroplast genome of A. selengensis and analysed its phylogenetic relationship with other 28 related species belonging to the Asteraceae family. The result showed that the whole genome was 151 215 bp in length with a typical conserved quadripartite structure. The total GC content of whole genome, LSC, SSC, and IRa/IRb regions was 37.46, 35.55, 30.81, and 43.09%, respectively. A total of 133 genes were identified, including 88 protein-coding, 37 transfer RNA, and eight ribosome RNA genes. Among these genes, nineteen genes contained a single intron and two genes contained two introns. The phylogenetic relationship showed that A. selengensis was similar to A. gmelinii. The complete chloroplast genome presented here will enrich the genetic resources of medicinal plant and promote our understanding of the phylogeny of Artemisia within the Asteraceae family.
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spelling pubmed-78001992021-01-19 The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake Peng, Jiao Zhao, Yunlin Li, Chaoyang Xu, Zhenggang Mitochondrial DNA B Resour Mitogenome Announcement Artemisia selengensis Turcz (Louhao in Chinese) is a widely used health food and a well-known traditional Chinese medicine. However, only a small part of the chloroplast genome data of Artemisia has been reported and there was no report for A. selengensis. In this study, we presented the complete chloroplast genome of A. selengensis and analysed its phylogenetic relationship with other 28 related species belonging to the Asteraceae family. The result showed that the whole genome was 151 215 bp in length with a typical conserved quadripartite structure. The total GC content of whole genome, LSC, SSC, and IRa/IRb regions was 37.46, 35.55, 30.81, and 43.09%, respectively. A total of 133 genes were identified, including 88 protein-coding, 37 transfer RNA, and eight ribosome RNA genes. Among these genes, nineteen genes contained a single intron and two genes contained two introns. The phylogenetic relationship showed that A. selengensis was similar to A. gmelinii. The complete chloroplast genome presented here will enrich the genetic resources of medicinal plant and promote our understanding of the phylogeny of Artemisia within the Asteraceae family. Taylor & Francis 2018-08-17 /pmc/articles/PMC7800199/ /pubmed/33474361 http://dx.doi.org/10.1080/23802359.2018.1501322 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Peng, Jiao
Zhao, Yunlin
Li, Chaoyang
Xu, Zhenggang
The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
title The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
title_full The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
title_fullStr The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
title_full_unstemmed The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
title_short The complete chloroplast genome and phylogeny of Artemisia selengensis in Dongting Lake
title_sort complete chloroplast genome and phylogeny of artemisia selengensis in dongting lake
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800199/
https://www.ncbi.nlm.nih.gov/pubmed/33474361
http://dx.doi.org/10.1080/23802359.2018.1501322
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