The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis

In this study, we obtained the complete plastid genome of Grateloupia filicina (Lamouroux) C. Agardh using the high-throughput sequencing method. It had circular mapping organization with the length of 195,990 bp and contained 265 genes including 195 protein-coding genes, three rRNA genes, one tmRNA...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Jing, Tang, Xianming, Zhou Chen, Wei, Liu, Tao, Li, Yue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800207/
https://www.ncbi.nlm.nih.gov/pubmed/33474454
http://dx.doi.org/10.1080/23802359.2018.1524279
_version_ 1783635299739369472
author Zhang, Jing
Tang, Xianming
Zhou Chen, Wei
Liu, Tao
Li, Yue
author_facet Zhang, Jing
Tang, Xianming
Zhou Chen, Wei
Liu, Tao
Li, Yue
author_sort Zhang, Jing
collection PubMed
description In this study, we obtained the complete plastid genome of Grateloupia filicina (Lamouroux) C. Agardh using the high-throughput sequencing method. It had circular mapping organization with the length of 195,990 bp and contained 265 genes including 195 protein-coding genes, three rRNA genes, one tmRNA gene, 28 tRNA genes and 38 unidentified open reading frames (ORFs). Moreover, phylogenetic analysis revealed that G. filicina firstly clustered with Grateloupia taiwanensis. The complete plastid genome obtained in this work would be useful for further understanding the evolution of Grateloupia.
format Online
Article
Text
id pubmed-7800207
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78002072021-01-19 The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis Zhang, Jing Tang, Xianming Zhou Chen, Wei Liu, Tao Li, Yue Mitochondrial DNA B Resour Mitogenome Announcement In this study, we obtained the complete plastid genome of Grateloupia filicina (Lamouroux) C. Agardh using the high-throughput sequencing method. It had circular mapping organization with the length of 195,990 bp and contained 265 genes including 195 protein-coding genes, three rRNA genes, one tmRNA gene, 28 tRNA genes and 38 unidentified open reading frames (ORFs). Moreover, phylogenetic analysis revealed that G. filicina firstly clustered with Grateloupia taiwanensis. The complete plastid genome obtained in this work would be useful for further understanding the evolution of Grateloupia. Taylor & Francis 2018-10-30 /pmc/articles/PMC7800207/ /pubmed/33474454 http://dx.doi.org/10.1080/23802359.2018.1524279 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Jing
Tang, Xianming
Zhou Chen, Wei
Liu, Tao
Li, Yue
The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
title The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
title_full The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
title_fullStr The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
title_full_unstemmed The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
title_short The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
title_sort complete plastid genome of grateloupia filicina (rhodophyta) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800207/
https://www.ncbi.nlm.nih.gov/pubmed/33474454
http://dx.doi.org/10.1080/23802359.2018.1524279
work_keys_str_mv AT zhangjing thecompleteplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT tangxianming thecompleteplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT zhouchenwei thecompleteplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT liutao thecompleteplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT liyue thecompleteplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT zhangjing completeplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT tangxianming completeplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT zhouchenwei completeplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT liutao completeplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis
AT liyue completeplastidgenomeofgrateloupiafilicinarhodophytaandphylogeneticanalysis

Ejemplares similares