The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae

This paper describes the genomic architecture of a complete mitogenome from a red-bellied parrot (Poicephalus rufiventris). The mitogenome sequence was circular and 15,524 bp in length. Compared to other Psittacidae species, the genome encoded a conserved structure consisting of 13 protein-coding ge...

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Autores principales: Sarker, Subir, Das, Shubhagata, Ghorashi, Seyed A., Forwood, Jade K., Helbig, Karla, Raidal, Shane R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800220/
https://www.ncbi.nlm.nih.gov/pubmed/33474115
http://dx.doi.org/10.1080/23802359.2018.1437818
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author Sarker, Subir
Das, Shubhagata
Ghorashi, Seyed A.
Forwood, Jade K.
Helbig, Karla
Raidal, Shane R.
author_facet Sarker, Subir
Das, Shubhagata
Ghorashi, Seyed A.
Forwood, Jade K.
Helbig, Karla
Raidal, Shane R.
author_sort Sarker, Subir
collection PubMed
description This paper describes the genomic architecture of a complete mitogenome from a red-bellied parrot (Poicephalus rufiventris). The mitogenome sequence was circular and 15,524 bp in length. Compared to other Psittacidae species, the genome encoded a conserved structure consisting of 13 protein-coding genes (PCGs), two rRNA genes, 21 tRNA genes, and two control regions, however, the mitogenome was missing a part of control region and a tRNA-Leu. The lengths of 12S and 16S ribosomal RNA were 975 bp and 1569 bp, respectively. The overall base composition of the mitogenome of P. rufiventris was dominated by higher AT (51.6%) than GC (48.4%) content. The complete mitogenome sequence determined in this study would be useful to track the deeper evolutionary history and the conservation of P. rufiventris.
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spelling pubmed-78002202021-01-19 The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae Sarker, Subir Das, Shubhagata Ghorashi, Seyed A. Forwood, Jade K. Helbig, Karla Raidal, Shane R. Mitochondrial DNA B Resour Mitogenome Announcement This paper describes the genomic architecture of a complete mitogenome from a red-bellied parrot (Poicephalus rufiventris). The mitogenome sequence was circular and 15,524 bp in length. Compared to other Psittacidae species, the genome encoded a conserved structure consisting of 13 protein-coding genes (PCGs), two rRNA genes, 21 tRNA genes, and two control regions, however, the mitogenome was missing a part of control region and a tRNA-Leu. The lengths of 12S and 16S ribosomal RNA were 975 bp and 1569 bp, respectively. The overall base composition of the mitogenome of P. rufiventris was dominated by higher AT (51.6%) than GC (48.4%) content. The complete mitogenome sequence determined in this study would be useful to track the deeper evolutionary history and the conservation of P. rufiventris. Taylor & Francis 2018-02-10 /pmc/articles/PMC7800220/ /pubmed/33474115 http://dx.doi.org/10.1080/23802359.2018.1437818 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Sarker, Subir
Das, Shubhagata
Ghorashi, Seyed A.
Forwood, Jade K.
Helbig, Karla
Raidal, Shane R.
The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae
title The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae
title_full The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae
title_fullStr The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae
title_full_unstemmed The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae
title_short The first complete mitogenome of red-bellied parrot (Poicephalus rufiventris) resolves phylogenetic status within Psittacidae
title_sort first complete mitogenome of red-bellied parrot (poicephalus rufiventris) resolves phylogenetic status within psittacidae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800220/
https://www.ncbi.nlm.nih.gov/pubmed/33474115
http://dx.doi.org/10.1080/23802359.2018.1437818
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