Cargando…

The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)

Telmatobius chusmisensis is an endemic frog of northern Chile that is only known at its type locality, Chusmisa. In this study, the complete mitochondrial genome of Telmatobius chusmisensis was assembled using high-throughput sequencing data, yielding a circular genome of 19 312 bp with a nucleotide...

Descripción completa

Detalles Bibliográficos
Autores principales: Pastenes, Luis, Valdivieso, Camilo, Del Pozo, Talía, Méndez, Marco A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800222/
https://www.ncbi.nlm.nih.gov/pubmed/33473436
http://dx.doi.org/10.1080/23802359.2016.1144097
_version_ 1783635303312916480
author Pastenes, Luis
Valdivieso, Camilo
Del Pozo, Talía
Méndez, Marco A.
author_facet Pastenes, Luis
Valdivieso, Camilo
Del Pozo, Talía
Méndez, Marco A.
author_sort Pastenes, Luis
collection PubMed
description Telmatobius chusmisensis is an endemic frog of northern Chile that is only known at its type locality, Chusmisa. In this study, the complete mitochondrial genome of Telmatobius chusmisensis was assembled using high-throughput sequencing data, yielding a circular genome of 19 312 bp with a nucleotide composition of A = 30.8%, C = 24.4%, G = 13.6% and T = 31.2%. Its gene composition and structure were similar to other anuran genomes available: 13 protein-coding genes, two rRNA genes, 22 tRNA genes and the D-loop region. Phylogenetic analysis using Bayesian inference (BI) and maximum likelihood (ML) showed that Telmatobius chusmisensis, T. bolivianus and T. vellardi are a highly supported monophyletic group. This genome information will allow us to gain a better understanding into phylogenetic and phylogeographic relationships in the genus Telmatobius.
format Online
Article
Text
id pubmed-7800222
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78002222021-01-19 The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae) Pastenes, Luis Valdivieso, Camilo Del Pozo, Talía Méndez, Marco A. Mitochondrial DNA B Resour Mitogenome Announcement Telmatobius chusmisensis is an endemic frog of northern Chile that is only known at its type locality, Chusmisa. In this study, the complete mitochondrial genome of Telmatobius chusmisensis was assembled using high-throughput sequencing data, yielding a circular genome of 19 312 bp with a nucleotide composition of A = 30.8%, C = 24.4%, G = 13.6% and T = 31.2%. Its gene composition and structure were similar to other anuran genomes available: 13 protein-coding genes, two rRNA genes, 22 tRNA genes and the D-loop region. Phylogenetic analysis using Bayesian inference (BI) and maximum likelihood (ML) showed that Telmatobius chusmisensis, T. bolivianus and T. vellardi are a highly supported monophyletic group. This genome information will allow us to gain a better understanding into phylogenetic and phylogeographic relationships in the genus Telmatobius. Taylor & Francis 2016-03-28 /pmc/articles/PMC7800222/ /pubmed/33473436 http://dx.doi.org/10.1080/23802359.2016.1144097 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Pastenes, Luis
Valdivieso, Camilo
Del Pozo, Talía
Méndez, Marco A.
The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)
title The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)
title_full The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)
title_fullStr The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)
title_full_unstemmed The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)
title_short The complete mitochondrial genome of the Chilean endemic frog Telmatobius chusmisensis Formas, Cuevas & Nuñez, 2006 (Anura, Telmatobiidae)
title_sort complete mitochondrial genome of the chilean endemic frog telmatobius chusmisensis formas, cuevas & nuñez, 2006 (anura, telmatobiidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800222/
https://www.ncbi.nlm.nih.gov/pubmed/33473436
http://dx.doi.org/10.1080/23802359.2016.1144097
work_keys_str_mv AT pastenesluis thecompletemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT valdiviesocamilo thecompletemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT delpozotalia thecompletemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT mendezmarcoa thecompletemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT pastenesluis completemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT valdiviesocamilo completemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT delpozotalia completemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae
AT mendezmarcoa completemitochondrialgenomeofthechileanendemicfrogtelmatobiuschusmisensisformascuevasnunez2006anuratelmatobiidae