Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type

Complete mitochondrial genome of Phytophthora infestans, A(2) mating type (MT) with a size of ≅37,767 bp was sequenced. A total of 53 protein-coding genes are predicted on both strands, including 25 tRNA, 2 rRNA, and 18 respiratory proteins. Gene order of A(2)MT was consistent with that established...

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Autores principales: Patil, Virupaksh U., Vanishree, G., Pattanayak, Debasis, Sharma, Sanjeev, Bhardwaj, Vinay, Singh, B. P., Chakrabarti, S. K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800244/
https://www.ncbi.nlm.nih.gov/pubmed/33473726
http://dx.doi.org/10.1080/23802359.2017.1280699
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author Patil, Virupaksh U.
Vanishree, G.
Pattanayak, Debasis
Sharma, Sanjeev
Bhardwaj, Vinay
Singh, B. P.
Chakrabarti, S. K.
author_facet Patil, Virupaksh U.
Vanishree, G.
Pattanayak, Debasis
Sharma, Sanjeev
Bhardwaj, Vinay
Singh, B. P.
Chakrabarti, S. K.
author_sort Patil, Virupaksh U.
collection PubMed
description Complete mitochondrial genome of Phytophthora infestans, A(2) mating type (MT) with a size of ≅37,767 bp was sequenced. A total of 53 protein-coding genes are predicted on both strands, including 25 tRNA, 2 rRNA, and 18 respiratory proteins. Gene order of A(2)MT was consistent with that established in A(1), despite high level of polymorphism in both coding and non-coding regions. The mtDNA of A(2)MT was found to have 99.5% and 99.4% homology with Ia and Ib, whereas 94.7% and 94.3% with IIa and IIb, respectively. Study of repeats revealed a dinucleotide (AT)(9) specific to A(1) and homology of cox1 gene sequence revealed the relationship among 50 Phytophthora species.
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spelling pubmed-78002442021-01-19 Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type Patil, Virupaksh U. Vanishree, G. Pattanayak, Debasis Sharma, Sanjeev Bhardwaj, Vinay Singh, B. P. Chakrabarti, S. K. Mitochondrial DNA B Resour Mitogenome Announcement Complete mitochondrial genome of Phytophthora infestans, A(2) mating type (MT) with a size of ≅37,767 bp was sequenced. A total of 53 protein-coding genes are predicted on both strands, including 25 tRNA, 2 rRNA, and 18 respiratory proteins. Gene order of A(2)MT was consistent with that established in A(1), despite high level of polymorphism in both coding and non-coding regions. The mtDNA of A(2)MT was found to have 99.5% and 99.4% homology with Ia and Ib, whereas 94.7% and 94.3% with IIa and IIb, respectively. Study of repeats revealed a dinucleotide (AT)(9) specific to A(1) and homology of cox1 gene sequence revealed the relationship among 50 Phytophthora species. Taylor & Francis 2017-02-16 /pmc/articles/PMC7800244/ /pubmed/33473726 http://dx.doi.org/10.1080/23802359.2017.1280699 Text en © 2017 ICAR - Central Potato Research Institute, India. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Patil, Virupaksh U.
Vanishree, G.
Pattanayak, Debasis
Sharma, Sanjeev
Bhardwaj, Vinay
Singh, B. P.
Chakrabarti, S. K.
Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type
title Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type
title_full Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type
title_fullStr Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type
title_full_unstemmed Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type
title_short Complete mitogenome mapping of potato late blight pathogen, Phytophthora infestans A(2) mating type
title_sort complete mitogenome mapping of potato late blight pathogen, phytophthora infestans a(2) mating type
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800244/
https://www.ncbi.nlm.nih.gov/pubmed/33473726
http://dx.doi.org/10.1080/23802359.2017.1280699
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