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Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan

Thalamita danae (Stimpson1858), re-described as a new report, based on an integrative taxonomy approach combining 16S rRNA partial sequence of mitochondrial DNA and morphological analyses was used for the accurate identification of specimens. The morphological and molecular analysis provides the con...

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Autores principales: Saher, Noor Us, Naz, Farah, Siddiqa, Syeda Mariam, Khan, Mohammad Mumtaz, Kamal, Mustafa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800256/
https://www.ncbi.nlm.nih.gov/pubmed/33490505
http://dx.doi.org/10.1080/23802359.2018.1438855
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author Saher, Noor Us
Naz, Farah
Siddiqa, Syeda Mariam
Khan, Mohammad Mumtaz
Kamal, Mustafa
author_facet Saher, Noor Us
Naz, Farah
Siddiqa, Syeda Mariam
Khan, Mohammad Mumtaz
Kamal, Mustafa
author_sort Saher, Noor Us
collection PubMed
description Thalamita danae (Stimpson1858), re-described as a new report, based on an integrative taxonomy approach combining 16S rRNA partial sequence of mitochondrial DNA and morphological analyses was used for the accurate identification of specimens. The morphological and molecular analysis provides the confirm evidence of T. danae in coastal waters of Pakistan. Results were confirmed by amplification of partial sequences of 16S rRNA mt-DNA gene and the sequence was searched for similarity using BLASTn (Basic Local Alignment Tool), the result showed 97% sequence similarity with partial sequences of T. danae Stimpson, 1858 as obtained from gene bank. The attained sequence was submitted to gene bank after confirmation of genetic and morphological similarity. High sequence similarity with accession no: FJ152165.1 indicated, that misidentification of species does not occur.
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spelling pubmed-78002562021-01-21 Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan Saher, Noor Us Naz, Farah Siddiqa, Syeda Mariam Khan, Mohammad Mumtaz Kamal, Mustafa Mitochondrial DNA B Resour Mito Communication Thalamita danae (Stimpson1858), re-described as a new report, based on an integrative taxonomy approach combining 16S rRNA partial sequence of mitochondrial DNA and morphological analyses was used for the accurate identification of specimens. The morphological and molecular analysis provides the confirm evidence of T. danae in coastal waters of Pakistan. Results were confirmed by amplification of partial sequences of 16S rRNA mt-DNA gene and the sequence was searched for similarity using BLASTn (Basic Local Alignment Tool), the result showed 97% sequence similarity with partial sequences of T. danae Stimpson, 1858 as obtained from gene bank. The attained sequence was submitted to gene bank after confirmation of genetic and morphological similarity. High sequence similarity with accession no: FJ152165.1 indicated, that misidentification of species does not occur. Taylor & Francis 2018-03-10 /pmc/articles/PMC7800256/ /pubmed/33490505 http://dx.doi.org/10.1080/23802359.2018.1438855 Text en © 2018 CEMB. University of Karachi, Pakistan. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mito Communication
Saher, Noor Us
Naz, Farah
Siddiqa, Syeda Mariam
Khan, Mohammad Mumtaz
Kamal, Mustafa
Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan
title Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan
title_full Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan
title_fullStr Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan
title_full_unstemmed Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan
title_short Re description and molecular identification of Thalamita danae (Stimpson 1858) (Decapoda: Brachyura: Portunidae) based on fresh material from the coastal waters, Pakistan
title_sort re description and molecular identification of thalamita danae (stimpson 1858) (decapoda: brachyura: portunidae) based on fresh material from the coastal waters, pakistan
topic Mito Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800256/
https://www.ncbi.nlm.nih.gov/pubmed/33490505
http://dx.doi.org/10.1080/23802359.2018.1438855
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