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Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae)
Carinotetraodon travancoricus was classified as vulnerable on the IUCN Red List due to habitat loss and overharvesting for the aquarium trade. To gain its molecular information and thus contribute to help in conserving this vulnerable species, we determined the complete mitochondrial DNA of the C. t...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800267/ https://www.ncbi.nlm.nih.gov/pubmed/33490556 http://dx.doi.org/10.1080/23802359.2018.1511843 |
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author | Liu, Bingjian Zhu, Kehua Liu, Yifan Jiang, Lihua Lü, Zhenming Liu, Liqin Zhang, Weinan Liu, Zhu Duan, Wen Gong, Li |
author_facet | Liu, Bingjian Zhu, Kehua Liu, Yifan Jiang, Lihua Lü, Zhenming Liu, Liqin Zhang, Weinan Liu, Zhu Duan, Wen Gong, Li |
author_sort | Liu, Bingjian |
collection | PubMed |
description | Carinotetraodon travancoricus was classified as vulnerable on the IUCN Red List due to habitat loss and overharvesting for the aquarium trade. To gain its molecular information and thus contribute to help in conserving this vulnerable species, we determined the complete mitochondrial DNA of the C. travancoricus. The size of the molecule is 16,542 nucleotides, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, a putative control region, and 1 origin of replication on the light-strand. The overall base composition includes C(28.8%), A(28.5%), T(27.1%), and G(15.6%). Moreover, the 13 PCGs encode 3800 amino acids in total. The result of the phylogenetic tree supports C. octofasciatus has a closest relationship with Tetraodon nigroviridis. |
format | Online Article Text |
id | pubmed-7800267 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78002672021-01-21 Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) Liu, Bingjian Zhu, Kehua Liu, Yifan Jiang, Lihua Lü, Zhenming Liu, Liqin Zhang, Weinan Liu, Zhu Duan, Wen Gong, Li Mitochondrial DNA B Resour Mitogenome Announcement Carinotetraodon travancoricus was classified as vulnerable on the IUCN Red List due to habitat loss and overharvesting for the aquarium trade. To gain its molecular information and thus contribute to help in conserving this vulnerable species, we determined the complete mitochondrial DNA of the C. travancoricus. The size of the molecule is 16,542 nucleotides, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, a putative control region, and 1 origin of replication on the light-strand. The overall base composition includes C(28.8%), A(28.5%), T(27.1%), and G(15.6%). Moreover, the 13 PCGs encode 3800 amino acids in total. The result of the phylogenetic tree supports C. octofasciatus has a closest relationship with Tetraodon nigroviridis. Taylor & Francis 2018-10-26 /pmc/articles/PMC7800267/ /pubmed/33490556 http://dx.doi.org/10.1080/23802359.2018.1511843 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Liu, Bingjian Zhu, Kehua Liu, Yifan Jiang, Lihua Lü, Zhenming Liu, Liqin Zhang, Weinan Liu, Zhu Duan, Wen Gong, Li Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) |
title | Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) |
title_full | Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) |
title_fullStr | Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) |
title_full_unstemmed | Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) |
title_short | Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae) |
title_sort | complete mitochondrial genome of the vulnerable malabar pufferfish carinotetraodon travancoricus (tetraodontiformes, tetraodontidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800267/ https://www.ncbi.nlm.nih.gov/pubmed/33490556 http://dx.doi.org/10.1080/23802359.2018.1511843 |
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