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The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
The complete plastome sequence of Durio zibethinus L. (Malvaceae) is determined in this study (NCBI acc. no. MG138151). D. zibethinus is an important fruit crop in Southeastern Asia and known as the ‘king of fruit’. Our D. zibethinus plastome is the first reported sequences from the subfamily Helict...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800296/ https://www.ncbi.nlm.nih.gov/pubmed/33490476 http://dx.doi.org/10.1080/23802359.2017.1398615 |
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author | Cheon, Se-Hwan Jo, Sangjin Kim, Hoe-Won Kim, Young-Kee Sohn, Jung-Yeon Kim, Ki-Joong |
author_facet | Cheon, Se-Hwan Jo, Sangjin Kim, Hoe-Won Kim, Young-Kee Sohn, Jung-Yeon Kim, Ki-Joong |
author_sort | Cheon, Se-Hwan |
collection | PubMed |
description | The complete plastome sequence of Durio zibethinus L. (Malvaceae) is determined in this study (NCBI acc. no. MG138151). D. zibethinus is an important fruit crop in Southeastern Asia and known as the ‘king of fruit’. Our D. zibethinus plastome is the first reported sequences from the subfamily Helicteroideae of Malvaceae. The plastome sequence of D. zibethinus is 163,974 bp in length and it is composed of a pair of 23,679 bp inverted repeat regions separated by large and small single-copy regions of 95,704 bp and 20,912 bp, respectively. The gene order and structure of the D. zibethinus are similar to those of the typical plastome of land plants. The plastome encodes 113 genes, of which 79 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Fifteen genes contain single intron and two genes have two introns. A total of 144 simple sequence repeats (SSR) were identified in the genome. Phylogenetic analysis show that D. zibethinus (Helicteroideae) is sister group of Tilia (Tilioideae) clade with 100% bootstrap support. |
format | Online Article Text |
id | pubmed-7800296 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78002962021-01-21 The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) Cheon, Se-Hwan Jo, Sangjin Kim, Hoe-Won Kim, Young-Kee Sohn, Jung-Yeon Kim, Ki-Joong Mitochondrial DNA B Resour Mitogenome Announcement The complete plastome sequence of Durio zibethinus L. (Malvaceae) is determined in this study (NCBI acc. no. MG138151). D. zibethinus is an important fruit crop in Southeastern Asia and known as the ‘king of fruit’. Our D. zibethinus plastome is the first reported sequences from the subfamily Helicteroideae of Malvaceae. The plastome sequence of D. zibethinus is 163,974 bp in length and it is composed of a pair of 23,679 bp inverted repeat regions separated by large and small single-copy regions of 95,704 bp and 20,912 bp, respectively. The gene order and structure of the D. zibethinus are similar to those of the typical plastome of land plants. The plastome encodes 113 genes, of which 79 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Fifteen genes contain single intron and two genes have two introns. A total of 144 simple sequence repeats (SSR) were identified in the genome. Phylogenetic analysis show that D. zibethinus (Helicteroideae) is sister group of Tilia (Tilioideae) clade with 100% bootstrap support. Taylor & Francis 2017-11-06 /pmc/articles/PMC7800296/ /pubmed/33490476 http://dx.doi.org/10.1080/23802359.2017.1398615 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Cheon, Se-Hwan Jo, Sangjin Kim, Hoe-Won Kim, Young-Kee Sohn, Jung-Yeon Kim, Ki-Joong The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) |
title | The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) |
title_full | The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) |
title_fullStr | The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) |
title_full_unstemmed | The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) |
title_short | The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) |
title_sort | complete plastome sequence of durian, durio zibethinus l. (malvaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800296/ https://www.ncbi.nlm.nih.gov/pubmed/33490476 http://dx.doi.org/10.1080/23802359.2017.1398615 |
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