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The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)

The complete plastome sequence of Durio zibethinus L. (Malvaceae) is determined in this study (NCBI acc. no. MG138151). D. zibethinus is an important fruit crop in Southeastern Asia and known as the ‘king of fruit’. Our D. zibethinus plastome is the first reported sequences from the subfamily Helict...

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Autores principales: Cheon, Se-Hwan, Jo, Sangjin, Kim, Hoe-Won, Kim, Young-Kee, Sohn, Jung-Yeon, Kim, Ki-Joong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800296/
https://www.ncbi.nlm.nih.gov/pubmed/33490476
http://dx.doi.org/10.1080/23802359.2017.1398615
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author Cheon, Se-Hwan
Jo, Sangjin
Kim, Hoe-Won
Kim, Young-Kee
Sohn, Jung-Yeon
Kim, Ki-Joong
author_facet Cheon, Se-Hwan
Jo, Sangjin
Kim, Hoe-Won
Kim, Young-Kee
Sohn, Jung-Yeon
Kim, Ki-Joong
author_sort Cheon, Se-Hwan
collection PubMed
description The complete plastome sequence of Durio zibethinus L. (Malvaceae) is determined in this study (NCBI acc. no. MG138151). D. zibethinus is an important fruit crop in Southeastern Asia and known as the ‘king of fruit’. Our D. zibethinus plastome is the first reported sequences from the subfamily Helicteroideae of Malvaceae. The plastome sequence of D. zibethinus is 163,974 bp in length and it is composed of a pair of 23,679 bp inverted repeat regions separated by large and small single-copy regions of 95,704 bp and 20,912 bp, respectively. The gene order and structure of the D. zibethinus are similar to those of the typical plastome of land plants. The plastome encodes 113 genes, of which 79 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Fifteen genes contain single intron and two genes have two introns. A total of 144 simple sequence repeats (SSR) were identified in the genome. Phylogenetic analysis show that D. zibethinus (Helicteroideae) is sister group of Tilia (Tilioideae) clade with 100% bootstrap support.
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spelling pubmed-78002962021-01-21 The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae) Cheon, Se-Hwan Jo, Sangjin Kim, Hoe-Won Kim, Young-Kee Sohn, Jung-Yeon Kim, Ki-Joong Mitochondrial DNA B Resour Mitogenome Announcement The complete plastome sequence of Durio zibethinus L. (Malvaceae) is determined in this study (NCBI acc. no. MG138151). D. zibethinus is an important fruit crop in Southeastern Asia and known as the ‘king of fruit’. Our D. zibethinus plastome is the first reported sequences from the subfamily Helicteroideae of Malvaceae. The plastome sequence of D. zibethinus is 163,974 bp in length and it is composed of a pair of 23,679 bp inverted repeat regions separated by large and small single-copy regions of 95,704 bp and 20,912 bp, respectively. The gene order and structure of the D. zibethinus are similar to those of the typical plastome of land plants. The plastome encodes 113 genes, of which 79 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Fifteen genes contain single intron and two genes have two introns. A total of 144 simple sequence repeats (SSR) were identified in the genome. Phylogenetic analysis show that D. zibethinus (Helicteroideae) is sister group of Tilia (Tilioideae) clade with 100% bootstrap support. Taylor & Francis 2017-11-06 /pmc/articles/PMC7800296/ /pubmed/33490476 http://dx.doi.org/10.1080/23802359.2017.1398615 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Cheon, Se-Hwan
Jo, Sangjin
Kim, Hoe-Won
Kim, Young-Kee
Sohn, Jung-Yeon
Kim, Ki-Joong
The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
title The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
title_full The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
title_fullStr The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
title_full_unstemmed The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
title_short The complete plastome sequence of Durian, Durio zibethinus L. (Malvaceae)
title_sort complete plastome sequence of durian, durio zibethinus l. (malvaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800296/
https://www.ncbi.nlm.nih.gov/pubmed/33490476
http://dx.doi.org/10.1080/23802359.2017.1398615
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