Cargando…
The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800304/ https://www.ncbi.nlm.nih.gov/pubmed/33490464 http://dx.doi.org/10.1080/23802359.2017.1365638 |
_version_ | 1783635322432651264 |
---|---|
author | Liu, Xinming Zheng, Xinqing Hsiao, Chung-Der Lin, Rongcheng Shi, Xiaofeng Niu, Wentao |
author_facet | Liu, Xinming Zheng, Xinqing Hsiao, Chung-Der Lin, Rongcheng Shi, Xiaofeng Niu, Wentao |
author_sort | Liu, Xinming |
collection | PubMed |
description | Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded for the first time by low coverage whole genome sequencing method. The overall base composition of A. nana mitogenome is 25.0% for A, 13.8% for C, 24.4% for G, and 36.9% for T, and has low GC content of 38.2%. The assembled mitogenome, consisting of 18,480 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs, and two ribosomal RNAs genes. The A. nana has one big intron insert in ND5 gene. The complete mitogenome of A. nana provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony corals. |
format | Online Article Text |
id | pubmed-7800304 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78003042021-01-21 The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) Liu, Xinming Zheng, Xinqing Hsiao, Chung-Der Lin, Rongcheng Shi, Xiaofeng Niu, Wentao Mitochondrial DNA B Resour Mitogenome Announcement Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded for the first time by low coverage whole genome sequencing method. The overall base composition of A. nana mitogenome is 25.0% for A, 13.8% for C, 24.4% for G, and 36.9% for T, and has low GC content of 38.2%. The assembled mitogenome, consisting of 18,480 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs, and two ribosomal RNAs genes. The A. nana has one big intron insert in ND5 gene. The complete mitogenome of A. nana provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony corals. Taylor & Francis 2017-08-17 /pmc/articles/PMC7800304/ /pubmed/33490464 http://dx.doi.org/10.1080/23802359.2017.1365638 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Liu, Xinming Zheng, Xinqing Hsiao, Chung-Der Lin, Rongcheng Shi, Xiaofeng Niu, Wentao The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
title | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
title_full | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
title_fullStr | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
title_full_unstemmed | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
title_short | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
title_sort | complete mitogenome of acropora nana (cnidarian: acroporidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800304/ https://www.ncbi.nlm.nih.gov/pubmed/33490464 http://dx.doi.org/10.1080/23802359.2017.1365638 |
work_keys_str_mv | AT liuxinming thecompletemitogenomeofacroporananacnidarianacroporidae AT zhengxinqing thecompletemitogenomeofacroporananacnidarianacroporidae AT hsiaochungder thecompletemitogenomeofacroporananacnidarianacroporidae AT linrongcheng thecompletemitogenomeofacroporananacnidarianacroporidae AT shixiaofeng thecompletemitogenomeofacroporananacnidarianacroporidae AT niuwentao thecompletemitogenomeofacroporananacnidarianacroporidae AT liuxinming completemitogenomeofacroporananacnidarianacroporidae AT zhengxinqing completemitogenomeofacroporananacnidarianacroporidae AT hsiaochungder completemitogenomeofacroporananacnidarianacroporidae AT linrongcheng completemitogenomeofacroporananacnidarianacroporidae AT shixiaofeng completemitogenomeofacroporananacnidarianacroporidae AT niuwentao completemitogenomeofacroporananacnidarianacroporidae |