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The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)

Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded...

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Autores principales: Liu, Xinming, Zheng, Xinqing, Hsiao, Chung-Der, Lin, Rongcheng, Shi, Xiaofeng, Niu, Wentao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800304/
https://www.ncbi.nlm.nih.gov/pubmed/33490464
http://dx.doi.org/10.1080/23802359.2017.1365638
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author Liu, Xinming
Zheng, Xinqing
Hsiao, Chung-Der
Lin, Rongcheng
Shi, Xiaofeng
Niu, Wentao
author_facet Liu, Xinming
Zheng, Xinqing
Hsiao, Chung-Der
Lin, Rongcheng
Shi, Xiaofeng
Niu, Wentao
author_sort Liu, Xinming
collection PubMed
description Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded for the first time by low coverage whole genome sequencing method. The overall base composition of A. nana mitogenome is 25.0% for A, 13.8% for C, 24.4% for G, and 36.9% for T, and has low GC content of 38.2%. The assembled mitogenome, consisting of 18,480 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs, and two ribosomal RNAs genes. The A. nana has one big intron insert in ND5 gene. The complete mitogenome of A. nana provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony corals.
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spelling pubmed-78003042021-01-21 The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) Liu, Xinming Zheng, Xinqing Hsiao, Chung-Der Lin, Rongcheng Shi, Xiaofeng Niu, Wentao Mitochondrial DNA B Resour Mitogenome Announcement Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded for the first time by low coverage whole genome sequencing method. The overall base composition of A. nana mitogenome is 25.0% for A, 13.8% for C, 24.4% for G, and 36.9% for T, and has low GC content of 38.2%. The assembled mitogenome, consisting of 18,480 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs, and two ribosomal RNAs genes. The A. nana has one big intron insert in ND5 gene. The complete mitogenome of A. nana provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony corals. Taylor & Francis 2017-08-17 /pmc/articles/PMC7800304/ /pubmed/33490464 http://dx.doi.org/10.1080/23802359.2017.1365638 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Liu, Xinming
Zheng, Xinqing
Hsiao, Chung-Der
Lin, Rongcheng
Shi, Xiaofeng
Niu, Wentao
The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
title The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
title_full The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
title_fullStr The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
title_full_unstemmed The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
title_short The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
title_sort complete mitogenome of acropora nana (cnidarian: acroporidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800304/
https://www.ncbi.nlm.nih.gov/pubmed/33490464
http://dx.doi.org/10.1080/23802359.2017.1365638
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