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Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)

The mitochondrial genome of Ectophasia roundiventris (Loew, 1858), the first representative of subfamily Phasiinae, was sequenced and annotated. So far, there are four Tachinidae mitochondrial genomes, here, all of them are used in Neighbour-Join and Maximum Likelihood analyses. The nucleotide compo...

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Autores principales: Li, Xin, Ding, Shuangmei, Hou, Peng, Liu, Xiaoyan, Zhang, Chuntian, Yang, Ding
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800338/
https://www.ncbi.nlm.nih.gov/pubmed/33490457
http://dx.doi.org/10.1080/23802359.2017.1357447
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author Li, Xin
Ding, Shuangmei
Hou, Peng
Liu, Xiaoyan
Zhang, Chuntian
Yang, Ding
author_facet Li, Xin
Ding, Shuangmei
Hou, Peng
Liu, Xiaoyan
Zhang, Chuntian
Yang, Ding
author_sort Li, Xin
collection PubMed
description The mitochondrial genome of Ectophasia roundiventris (Loew, 1858), the first representative of subfamily Phasiinae, was sequenced and annotated. So far, there are four Tachinidae mitochondrial genomes, here, all of them are used in Neighbour-Join and Maximum Likelihood analyses. The nucleotide composition of Ectophasia roundiventris mitochondrial genome was 40.4% of A, 39.0% of T, 11.8% of C, 8.8% of G, 79.4% of A + T content. The codon ATG was the most popular start codon. The conservative stop codon was TAA, COX2, and ND5 terminated with an incomplete stop codon T, while the gene ND4 was ended with stop codon TA.
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spelling pubmed-78003382021-01-21 Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae) Li, Xin Ding, Shuangmei Hou, Peng Liu, Xiaoyan Zhang, Chuntian Yang, Ding Mitochondrial DNA B Resour Mitogenome Announcement The mitochondrial genome of Ectophasia roundiventris (Loew, 1858), the first representative of subfamily Phasiinae, was sequenced and annotated. So far, there are four Tachinidae mitochondrial genomes, here, all of them are used in Neighbour-Join and Maximum Likelihood analyses. The nucleotide composition of Ectophasia roundiventris mitochondrial genome was 40.4% of A, 39.0% of T, 11.8% of C, 8.8% of G, 79.4% of A + T content. The codon ATG was the most popular start codon. The conservative stop codon was TAA, COX2, and ND5 terminated with an incomplete stop codon T, while the gene ND4 was ended with stop codon TA. Taylor & Francis 2017-07-26 /pmc/articles/PMC7800338/ /pubmed/33490457 http://dx.doi.org/10.1080/23802359.2017.1357447 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Xin
Ding, Shuangmei
Hou, Peng
Liu, Xiaoyan
Zhang, Chuntian
Yang, Ding
Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)
title Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)
title_full Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)
title_fullStr Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)
title_full_unstemmed Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)
title_short Mitochondrial genome analysis of Ectophasia roundiventris (Diptera, Tachinidae)
title_sort mitochondrial genome analysis of ectophasia roundiventris (diptera, tachinidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800338/
https://www.ncbi.nlm.nih.gov/pubmed/33490457
http://dx.doi.org/10.1080/23802359.2017.1357447
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