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The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata)
The complete mitochondrial genome of Rhabdophis tigrinus (Reptilia: Squamata) is presented for the first time in this study. It is a circular molecule of 17 415 bp in length (GenBank accession no. KU641019), consisting of 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes (12S a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800361/ https://www.ncbi.nlm.nih.gov/pubmed/33490392 http://dx.doi.org/10.1080/23802359.2016.1155092 |
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author | Zhao, Dan Liu, Huan Zhao, Wen-Ge Liu, Peng |
author_facet | Zhao, Dan Liu, Huan Zhao, Wen-Ge Liu, Peng |
author_sort | Zhao, Dan |
collection | PubMed |
description | The complete mitochondrial genome of Rhabdophis tigrinus (Reptilia: Squamata) is presented for the first time in this study. It is a circular molecule of 17 415 bp in length (GenBank accession no. KU641019), consisting of 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes (12S and 16S rRNA) and two control regions (D-loop), with the typical gene order and direction of transcription in Serpentes. The overall base composition is 33.65% A, 26.70% C, 13.16% G and 26.49% T. Mitochondrial genomes analyses based on NJ method yield phylogenetic trees, including 14 reported snakes belonging to four families (Colubridae, Elapidae, Viperidae and Typhlopidae). These molecular data presented here provide a useful tool for systematic analyses of genus Rhabdophis and family Colubridae. |
format | Online Article Text |
id | pubmed-7800361 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78003612021-01-21 The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) Zhao, Dan Liu, Huan Zhao, Wen-Ge Liu, Peng Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Rhabdophis tigrinus (Reptilia: Squamata) is presented for the first time in this study. It is a circular molecule of 17 415 bp in length (GenBank accession no. KU641019), consisting of 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes (12S and 16S rRNA) and two control regions (D-loop), with the typical gene order and direction of transcription in Serpentes. The overall base composition is 33.65% A, 26.70% C, 13.16% G and 26.49% T. Mitochondrial genomes analyses based on NJ method yield phylogenetic trees, including 14 reported snakes belonging to four families (Colubridae, Elapidae, Viperidae and Typhlopidae). These molecular data presented here provide a useful tool for systematic analyses of genus Rhabdophis and family Colubridae. Taylor & Francis 2016-03-28 /pmc/articles/PMC7800361/ /pubmed/33490392 http://dx.doi.org/10.1080/23802359.2016.1155092 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Zhao, Dan Liu, Huan Zhao, Wen-Ge Liu, Peng The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) |
title | The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) |
title_full | The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) |
title_fullStr | The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) |
title_full_unstemmed | The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) |
title_short | The complete mitochondrial DNA sequence and the phylogenetic position of Rhabdophis tigrinus (Reptilia: Squamata) |
title_sort | complete mitochondrial dna sequence and the phylogenetic position of rhabdophis tigrinus (reptilia: squamata) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800361/ https://www.ncbi.nlm.nih.gov/pubmed/33490392 http://dx.doi.org/10.1080/23802359.2016.1155092 |
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