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The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae)
Lilium washingtonianum Kellogg is native to Western America and grows on slope in high subalpine. In the present study, the complete plastome of L. washingtonianum was sequenced. The plastome sequence was 151,967 bp long, with a large single copy region of 81,393 bp, a small single copy region of 17...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800384/ https://www.ncbi.nlm.nih.gov/pubmed/33490490 http://dx.doi.org/10.1080/23802359.2018.1424579 |
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author | Kim, Hyoung Tae Lim, Ki-Byung |
author_facet | Kim, Hyoung Tae Lim, Ki-Byung |
author_sort | Kim, Hyoung Tae |
collection | PubMed |
description | Lilium washingtonianum Kellogg is native to Western America and grows on slope in high subalpine. In the present study, the complete plastome of L. washingtonianum was sequenced. The plastome sequence was 151,967 bp long, with a large single copy region of 81,393 bp, a small single copy region of 17,352 bp, and two inverted repeat regions of 26,611 bp each. Total 133 genes were identified, including 83 coding genes, 8 ribosomal RNAs, 38 transfer RNAs, and 4 pseudogenes. Among four pseudogenes, pseudo ndhF gene was the first to report among Lilium species so far. The phylogenetic position of L. washingtonianum was sister to L. superbum but American lilies were not monophyletic. |
format | Online Article Text |
id | pubmed-7800384 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78003842021-01-21 The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) Kim, Hyoung Tae Lim, Ki-Byung Mitochondrial DNA B Resour Mitogenome Announcement Lilium washingtonianum Kellogg is native to Western America and grows on slope in high subalpine. In the present study, the complete plastome of L. washingtonianum was sequenced. The plastome sequence was 151,967 bp long, with a large single copy region of 81,393 bp, a small single copy region of 17,352 bp, and two inverted repeat regions of 26,611 bp each. Total 133 genes were identified, including 83 coding genes, 8 ribosomal RNAs, 38 transfer RNAs, and 4 pseudogenes. Among four pseudogenes, pseudo ndhF gene was the first to report among Lilium species so far. The phylogenetic position of L. washingtonianum was sister to L. superbum but American lilies were not monophyletic. Taylor & Francis 2018-01-11 /pmc/articles/PMC7800384/ /pubmed/33490490 http://dx.doi.org/10.1080/23802359.2018.1424579 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Kim, Hyoung Tae Lim, Ki-Byung The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) |
title | The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) |
title_full | The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) |
title_fullStr | The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) |
title_full_unstemmed | The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) |
title_short | The complete plastome sequence of Lilium wahingtonianum Kellogg (Liliaceae) |
title_sort | complete plastome sequence of lilium wahingtonianum kellogg (liliaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800384/ https://www.ncbi.nlm.nih.gov/pubmed/33490490 http://dx.doi.org/10.1080/23802359.2018.1424579 |
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