Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China

The complete cp genome of Piuns wangii was 117,014 bp in size, containing a large single copy (LSC, 64,061 bp) region and a small single copy (SSC, 52,007 bp) region separated by two reduced inverted repeats (IRs, 473 bp). A total of 107 genes were predicted, including 73 protein-coding genes, 30 tR...

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Autores principales: Yang, Mei-Qing, Du, Yan, Ling, Li-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800402/
https://www.ncbi.nlm.nih.gov/pubmed/33490571
http://dx.doi.org/10.1080/23802359.2018.1519381
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author Yang, Mei-Qing
Du, Yan
Ling, Li-Zhen
author_facet Yang, Mei-Qing
Du, Yan
Ling, Li-Zhen
author_sort Yang, Mei-Qing
collection PubMed
description The complete cp genome of Piuns wangii was 117,014 bp in size, containing a large single copy (LSC, 64,061 bp) region and a small single copy (SSC, 52,007 bp) region separated by two reduced inverted repeats (IRs, 473 bp). A total of 107 genes were predicted, including 73 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Most of the 51 simple sequence repeats (SSRs) were mononucleotides motifs of A/T types and were found to be located in non-coding regions. Phylogenetic analysis of Asian Pinus showed P. wangii clustered a strongly-supported clade with Pinus morrisonicola, Pinus sibirica, Pinus wallichiana, and Pinus pumila.
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spelling pubmed-78004022021-01-21 Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China Yang, Mei-Qing Du, Yan Ling, Li-Zhen Mitochondrial DNA B Resour Mitogenome Announcement The complete cp genome of Piuns wangii was 117,014 bp in size, containing a large single copy (LSC, 64,061 bp) region and a small single copy (SSC, 52,007 bp) region separated by two reduced inverted repeats (IRs, 473 bp). A total of 107 genes were predicted, including 73 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Most of the 51 simple sequence repeats (SSRs) were mononucleotides motifs of A/T types and were found to be located in non-coding regions. Phylogenetic analysis of Asian Pinus showed P. wangii clustered a strongly-supported clade with Pinus morrisonicola, Pinus sibirica, Pinus wallichiana, and Pinus pumila. Taylor & Francis 2018-10-29 /pmc/articles/PMC7800402/ /pubmed/33490571 http://dx.doi.org/10.1080/23802359.2018.1519381 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Mei-Qing
Du, Yan
Ling, Li-Zhen
Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China
title Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China
title_full Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China
title_fullStr Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China
title_full_unstemmed Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China
title_short Characterization of the complete chloroplast genome of Pinus wangii (Pinaceae), an endangered and endemic species in China
title_sort characterization of the complete chloroplast genome of pinus wangii (pinaceae), an endangered and endemic species in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800402/
https://www.ncbi.nlm.nih.gov/pubmed/33490571
http://dx.doi.org/10.1080/23802359.2018.1519381
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AT duyan characterizationofthecompletechloroplastgenomeofpinuswangiipinaceaeanendangeredandendemicspeciesinchina
AT linglizhen characterizationofthecompletechloroplastgenomeofpinuswangiipinaceaeanendangeredandendemicspeciesinchina

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