Cargando…
The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae)
Here, we present the first complete mitochondrial genome of the Red Tailed Loach Yasuhikotakia modesta (Teleostei: Botiidae) from Thailand, assembled from next-generation transcriptome sequencing data. The assembled transcript corresponds to the full length mitochondrial genome of Y. modesta, which...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800403/ https://www.ncbi.nlm.nih.gov/pubmed/33490436 http://dx.doi.org/10.1080/23802359.2016.1275851 |
_version_ | 1783635345538023424 |
---|---|
author | Grau, José Horacio Hilgers, Leon Altmüller, Janine Šlechtová, Vendula Bohlen, Jörg |
author_facet | Grau, José Horacio Hilgers, Leon Altmüller, Janine Šlechtová, Vendula Bohlen, Jörg |
author_sort | Grau, José Horacio |
collection | PubMed |
description | Here, we present the first complete mitochondrial genome of the Red Tailed Loach Yasuhikotakia modesta (Teleostei: Botiidae) from Thailand, assembled from next-generation transcriptome sequencing data. The assembled transcript corresponds to the full length mitochondrial genome of Y. modesta, which measured 16,865 bp in length, and contained 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. A slight A + T bias was observed in the mitogenome of Y. modesta with an overall base composition of 32.2% A, 25.8% T, 26.4% C, and 15.4% G, and a GC content of 41.8%. The gene arrangement was identical to that of previously described loach mitogenomes. |
format | Online Article Text |
id | pubmed-7800403 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78004032021-01-21 The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) Grau, José Horacio Hilgers, Leon Altmüller, Janine Šlechtová, Vendula Bohlen, Jörg Mitochondrial DNA B Resour Mitogenome Announcement Here, we present the first complete mitochondrial genome of the Red Tailed Loach Yasuhikotakia modesta (Teleostei: Botiidae) from Thailand, assembled from next-generation transcriptome sequencing data. The assembled transcript corresponds to the full length mitochondrial genome of Y. modesta, which measured 16,865 bp in length, and contained 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. A slight A + T bias was observed in the mitogenome of Y. modesta with an overall base composition of 32.2% A, 25.8% T, 26.4% C, and 15.4% G, and a GC content of 41.8%. The gene arrangement was identical to that of previously described loach mitogenomes. Taylor & Francis 2017-02-02 /pmc/articles/PMC7800403/ /pubmed/33490436 http://dx.doi.org/10.1080/23802359.2016.1275851 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Grau, José Horacio Hilgers, Leon Altmüller, Janine Šlechtová, Vendula Bohlen, Jörg The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) |
title | The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) |
title_full | The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) |
title_fullStr | The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) |
title_full_unstemmed | The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) |
title_short | The complete mitochondrial transcript of the red tail loach Yasuhikotakia modesta as assembled from RNAseq (Teleostei: Botiidae) |
title_sort | complete mitochondrial transcript of the red tail loach yasuhikotakia modesta as assembled from rnaseq (teleostei: botiidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800403/ https://www.ncbi.nlm.nih.gov/pubmed/33490436 http://dx.doi.org/10.1080/23802359.2016.1275851 |
work_keys_str_mv | AT graujosehoracio thecompletemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT hilgersleon thecompletemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT altmullerjanine thecompletemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT slechtovavendula thecompletemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT bohlenjorg thecompletemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT graujosehoracio completemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT hilgersleon completemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT altmullerjanine completemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT slechtovavendula completemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae AT bohlenjorg completemitochondrialtranscriptoftheredtailloachyasuhikotakiamodestaasassembledfromrnaseqteleosteibotiidae |