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The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
The plant genus Melastoma is comprised of members estimated to have formed through recent species radiation. Natural hybridization among member species further complicates taxonomy within the genus. Herein, we report the complete chloroplast genome of M. candidum, assembled from partial data obtaine...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800422/ https://www.ncbi.nlm.nih.gov/pubmed/33473785 http://dx.doi.org/10.1080/23802359.2017.1318680 |
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author | Ng, Wei Lun Cai, Yacheng Wu, Wei Zhou, Renchao |
author_facet | Ng, Wei Lun Cai, Yacheng Wu, Wei Zhou, Renchao |
author_sort | Ng, Wei Lun |
collection | PubMed |
description | The plant genus Melastoma is comprised of members estimated to have formed through recent species radiation. Natural hybridization among member species further complicates taxonomy within the genus. Herein, we report the complete chloroplast genome of M. candidum, assembled from partial data obtained from a parallel whole-genome Illumina paired-end sequencing effort on the species. The chloroplast genome was 156,682 bp in length, with a large single-copy (LSC) region of 86,084 bp, a small single-copy (SSC) region of 17,094 bp, separated by two inverted repeat (IR) regions of 26,752 bp each. It was predicted to contain a total of 129 genes, with an overall GC content of 37.17%. Phylogenetic analysis placed M. candidum in the same clade as species within the Melastomeae tribe of Melastomataceae. |
format | Online Article Text |
id | pubmed-7800422 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78004222021-01-19 The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) Ng, Wei Lun Cai, Yacheng Wu, Wei Zhou, Renchao Mitochondrial DNA B Resour Mitogenome Announcement The plant genus Melastoma is comprised of members estimated to have formed through recent species radiation. Natural hybridization among member species further complicates taxonomy within the genus. Herein, we report the complete chloroplast genome of M. candidum, assembled from partial data obtained from a parallel whole-genome Illumina paired-end sequencing effort on the species. The chloroplast genome was 156,682 bp in length, with a large single-copy (LSC) region of 86,084 bp, a small single-copy (SSC) region of 17,094 bp, separated by two inverted repeat (IR) regions of 26,752 bp each. It was predicted to contain a total of 129 genes, with an overall GC content of 37.17%. Phylogenetic analysis placed M. candidum in the same clade as species within the Melastomeae tribe of Melastomataceae. Taylor & Francis 2017-04-24 /pmc/articles/PMC7800422/ /pubmed/33473785 http://dx.doi.org/10.1080/23802359.2017.1318680 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Ng, Wei Lun Cai, Yacheng Wu, Wei Zhou, Renchao The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) |
title | The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) |
title_full | The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) |
title_fullStr | The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) |
title_short | The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) |
title_sort | complete chloroplast genome sequence of melastoma candidum (melastomataceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800422/ https://www.ncbi.nlm.nih.gov/pubmed/33473785 http://dx.doi.org/10.1080/23802359.2017.1318680 |
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