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The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)

The plant genus Melastoma is comprised of members estimated to have formed through recent species radiation. Natural hybridization among member species further complicates taxonomy within the genus. Herein, we report the complete chloroplast genome of M. candidum, assembled from partial data obtaine...

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Detalles Bibliográficos
Autores principales: Ng, Wei Lun, Cai, Yacheng, Wu, Wei, Zhou, Renchao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800422/
https://www.ncbi.nlm.nih.gov/pubmed/33473785
http://dx.doi.org/10.1080/23802359.2017.1318680
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author Ng, Wei Lun
Cai, Yacheng
Wu, Wei
Zhou, Renchao
author_facet Ng, Wei Lun
Cai, Yacheng
Wu, Wei
Zhou, Renchao
author_sort Ng, Wei Lun
collection PubMed
description The plant genus Melastoma is comprised of members estimated to have formed through recent species radiation. Natural hybridization among member species further complicates taxonomy within the genus. Herein, we report the complete chloroplast genome of M. candidum, assembled from partial data obtained from a parallel whole-genome Illumina paired-end sequencing effort on the species. The chloroplast genome was 156,682 bp in length, with a large single-copy (LSC) region of 86,084 bp, a small single-copy (SSC) region of 17,094 bp, separated by two inverted repeat (IR) regions of 26,752 bp each. It was predicted to contain a total of 129 genes, with an overall GC content of 37.17%. Phylogenetic analysis placed M. candidum in the same clade as species within the Melastomeae tribe of Melastomataceae.
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spelling pubmed-78004222021-01-19 The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae) Ng, Wei Lun Cai, Yacheng Wu, Wei Zhou, Renchao Mitochondrial DNA B Resour Mitogenome Announcement The plant genus Melastoma is comprised of members estimated to have formed through recent species radiation. Natural hybridization among member species further complicates taxonomy within the genus. Herein, we report the complete chloroplast genome of M. candidum, assembled from partial data obtained from a parallel whole-genome Illumina paired-end sequencing effort on the species. The chloroplast genome was 156,682 bp in length, with a large single-copy (LSC) region of 86,084 bp, a small single-copy (SSC) region of 17,094 bp, separated by two inverted repeat (IR) regions of 26,752 bp each. It was predicted to contain a total of 129 genes, with an overall GC content of 37.17%. Phylogenetic analysis placed M. candidum in the same clade as species within the Melastomeae tribe of Melastomataceae. Taylor & Francis 2017-04-24 /pmc/articles/PMC7800422/ /pubmed/33473785 http://dx.doi.org/10.1080/23802359.2017.1318680 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Ng, Wei Lun
Cai, Yacheng
Wu, Wei
Zhou, Renchao
The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
title The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
title_full The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
title_fullStr The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
title_full_unstemmed The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
title_short The complete chloroplast genome sequence of Melastoma candidum (Melastomataceae)
title_sort complete chloroplast genome sequence of melastoma candidum (melastomataceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800422/
https://www.ncbi.nlm.nih.gov/pubmed/33473785
http://dx.doi.org/10.1080/23802359.2017.1318680
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