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The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis
Glyptothorax cavia, a small-sized benthic fish, distributed in southwest China. In the present study, the complete mitochondrial genome of G. cavia was sequenced to be 16,529 bp in length, including 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs, a control region, and the origin of the...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800425/ https://www.ncbi.nlm.nih.gov/pubmed/33473791 http://dx.doi.org/10.1080/23802359.2017.1307701 |
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author | Li, Bo |
author_facet | Li, Bo |
author_sort | Li, Bo |
collection | PubMed |
description | Glyptothorax cavia, a small-sized benthic fish, distributed in southwest China. In the present study, the complete mitochondrial genome of G. cavia was sequenced to be 16,529 bp in length, including 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs, a control region, and the origin of the light strand replication. The overall nucleotide composition was 31.15% A, 25.86% T, 27.64% C, and 15.35% G, with an A + T bias of 57.01%. The gene composition and the structural arrangement of the G. cavia complete mtDNA were identical to most of the other vertebrates. This will provide a useful tool for understanding the genetic diversity, population structure, and conservation status of G. cavia in the future. |
format | Online Article Text |
id | pubmed-7800425 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78004252021-01-19 The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis Li, Bo Mitochondrial DNA B Resour Mitogenome Announcement Glyptothorax cavia, a small-sized benthic fish, distributed in southwest China. In the present study, the complete mitochondrial genome of G. cavia was sequenced to be 16,529 bp in length, including 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs, a control region, and the origin of the light strand replication. The overall nucleotide composition was 31.15% A, 25.86% T, 27.64% C, and 15.35% G, with an A + T bias of 57.01%. The gene composition and the structural arrangement of the G. cavia complete mtDNA were identical to most of the other vertebrates. This will provide a useful tool for understanding the genetic diversity, population structure, and conservation status of G. cavia in the future. Taylor & Francis 2017-05-08 /pmc/articles/PMC7800425/ /pubmed/33473791 http://dx.doi.org/10.1080/23802359.2017.1307701 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Bo The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis |
title | The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis |
title_full | The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis |
title_fullStr | The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis |
title_full_unstemmed | The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis |
title_short | The complete mitochondrial genome of Glyptothorax cavia (Siluriformes, Sisoridae, Glyptothorax): genome characterization and phylogenetic analysis |
title_sort | complete mitochondrial genome of glyptothorax cavia (siluriformes, sisoridae, glyptothorax): genome characterization and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800425/ https://www.ncbi.nlm.nih.gov/pubmed/33473791 http://dx.doi.org/10.1080/23802359.2017.1307701 |
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