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The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae)
We present the complete mitochondrial genome of Pomacea maculate in this study. The mitochondrial genome is 15,512 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes. Overall nucleotide compositions of the light strand are 41.13% of A, 30.81% of T, 15.25% of C and 12.81% o...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800453/ https://www.ncbi.nlm.nih.gov/pubmed/33474416 http://dx.doi.org/10.1080/23802359.2018.1511841 |
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author | Yang, Huirong Zhang, Jia-En Deng, Zhixin Luo, Hao Guo, Jing Zhang, Chunxia Wu, Yuanyuan Luo, Mingzhu Zhao, Benliang |
author_facet | Yang, Huirong Zhang, Jia-En Deng, Zhixin Luo, Hao Guo, Jing Zhang, Chunxia Wu, Yuanyuan Luo, Mingzhu Zhao, Benliang |
author_sort | Yang, Huirong |
collection | PubMed |
description | We present the complete mitochondrial genome of Pomacea maculate in this study. The mitochondrial genome is 15,512 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes. Overall nucleotide compositions of the light strand are 41.13% of A, 30.81% of T, 15.25% of C and 12.81% of G. Its gene arrangement and distribution are different from the typical vertebrates. The absence of D-loop is consistent with the Gastropoda, but at least one lengthy non-coding region is essential regulatory element for the initiation of transcription and replication. Phylogenetic tree is constructed by the maximum-likelihood method based on the complete mitochondrial genomes of 15 species of Caenogastropoda, using Helix aspersa as outgroup to assess their actual phylogenetic relationship and evolution. The result provides fundamental data for resolving phylogenetic and genetic problems related to effective management strategies. |
format | Online Article Text |
id | pubmed-7800453 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78004532021-01-19 The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) Yang, Huirong Zhang, Jia-En Deng, Zhixin Luo, Hao Guo, Jing Zhang, Chunxia Wu, Yuanyuan Luo, Mingzhu Zhao, Benliang Mitochondrial DNA B Resour Mitogenome Announcement We present the complete mitochondrial genome of Pomacea maculate in this study. The mitochondrial genome is 15,512 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes. Overall nucleotide compositions of the light strand are 41.13% of A, 30.81% of T, 15.25% of C and 12.81% of G. Its gene arrangement and distribution are different from the typical vertebrates. The absence of D-loop is consistent with the Gastropoda, but at least one lengthy non-coding region is essential regulatory element for the initiation of transcription and replication. Phylogenetic tree is constructed by the maximum-likelihood method based on the complete mitochondrial genomes of 15 species of Caenogastropoda, using Helix aspersa as outgroup to assess their actual phylogenetic relationship and evolution. The result provides fundamental data for resolving phylogenetic and genetic problems related to effective management strategies. Taylor & Francis 2018-10-26 /pmc/articles/PMC7800453/ /pubmed/33474416 http://dx.doi.org/10.1080/23802359.2018.1511841 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yang, Huirong Zhang, Jia-En Deng, Zhixin Luo, Hao Guo, Jing Zhang, Chunxia Wu, Yuanyuan Luo, Mingzhu Zhao, Benliang The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) |
title | The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) |
title_full | The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) |
title_fullStr | The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) |
title_full_unstemmed | The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) |
title_short | The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae) |
title_sort | complete mitochondrial genome of the apple snail pomacea maculate (gastropoda: ampullariidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800453/ https://www.ncbi.nlm.nih.gov/pubmed/33474416 http://dx.doi.org/10.1080/23802359.2018.1511841 |
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