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Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome

The objective of this study was to obtain the complete mitochondrial DNA sequence of chukar partridge, and to provide reference data for protection and utilization of these resources of chukar partridge. The complete mitochondrial genome sequence of the China chukar partridge was measured by PCR-bas...

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Autores principales: Zhang, Yanfang, Xie, Zhixun, Deng, Xianwen, Xie, Zhiqin, Xie, Liji, Fan, Qing, Luo, Sisi, Liu, Jiabo, Huang, Li, Huang, Jiaoling, Zeng, Tingting, Wang, Sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800480/
https://www.ncbi.nlm.nih.gov/pubmed/33473828
http://dx.doi.org/10.1080/23802359.2017.1339215
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author Zhang, Yanfang
Xie, Zhixun
Deng, Xianwen
Xie, Zhiqin
Xie, Liji
Fan, Qing
Luo, Sisi
Liu, Jiabo
Huang, Li
Huang, Jiaoling
Zeng, Tingting
Wang, Sheng
author_facet Zhang, Yanfang
Xie, Zhixun
Deng, Xianwen
Xie, Zhiqin
Xie, Liji
Fan, Qing
Luo, Sisi
Liu, Jiabo
Huang, Li
Huang, Jiaoling
Zeng, Tingting
Wang, Sheng
author_sort Zhang, Yanfang
collection PubMed
description The objective of this study was to obtain the complete mitochondrial DNA sequence of chukar partridge, and to provide reference data for protection and utilization of these resources of chukar partridge. The complete mitochondrial genome sequence of the China chukar partridge was measured by PCR-based methods and analysed in detail. Our research findings reveal that the entire mitochondrial genome of the chukar partridge is a circular molecule consisting of 16,688 bp (GenBank accession number: KY829450). The contents of A, T, C, and G in the mitochondrial genome were found to be 30.44%, 24.43%, 31.57%, and 13.56%, respectively. The complete mitochondrial genome of the chukar partridge has a typical structure, including 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and one control region (D-loop region). This complete mitochondrial genome sequence provides essential information in understanding phylogenetic relationships among Galliformes mitochondrial genomes.
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spelling pubmed-78004802021-01-19 Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome Zhang, Yanfang Xie, Zhixun Deng, Xianwen Xie, Zhiqin Xie, Liji Fan, Qing Luo, Sisi Liu, Jiabo Huang, Li Huang, Jiaoling Zeng, Tingting Wang, Sheng Mitochondrial DNA B Resour Mitogenome Announcement The objective of this study was to obtain the complete mitochondrial DNA sequence of chukar partridge, and to provide reference data for protection and utilization of these resources of chukar partridge. The complete mitochondrial genome sequence of the China chukar partridge was measured by PCR-based methods and analysed in detail. Our research findings reveal that the entire mitochondrial genome of the chukar partridge is a circular molecule consisting of 16,688 bp (GenBank accession number: KY829450). The contents of A, T, C, and G in the mitochondrial genome were found to be 30.44%, 24.43%, 31.57%, and 13.56%, respectively. The complete mitochondrial genome of the chukar partridge has a typical structure, including 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and one control region (D-loop region). This complete mitochondrial genome sequence provides essential information in understanding phylogenetic relationships among Galliformes mitochondrial genomes. Taylor & Francis 2017-06-16 /pmc/articles/PMC7800480/ /pubmed/33473828 http://dx.doi.org/10.1080/23802359.2017.1339215 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Yanfang
Xie, Zhixun
Deng, Xianwen
Xie, Zhiqin
Xie, Liji
Fan, Qing
Luo, Sisi
Liu, Jiabo
Huang, Li
Huang, Jiaoling
Zeng, Tingting
Wang, Sheng
Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
title Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
title_full Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
title_fullStr Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
title_full_unstemmed Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
title_short Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
title_sort complete sequence cloning and bioinformatics analysis of the chukar partridge (alectoris chukar, aves, galliformes) in guangxi base on mitochondrial genome
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800480/
https://www.ncbi.nlm.nih.gov/pubmed/33473828
http://dx.doi.org/10.1080/23802359.2017.1339215
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