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Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome
The objective of this study was to obtain the complete mitochondrial DNA sequence of chukar partridge, and to provide reference data for protection and utilization of these resources of chukar partridge. The complete mitochondrial genome sequence of the China chukar partridge was measured by PCR-bas...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800480/ https://www.ncbi.nlm.nih.gov/pubmed/33473828 http://dx.doi.org/10.1080/23802359.2017.1339215 |
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author | Zhang, Yanfang Xie, Zhixun Deng, Xianwen Xie, Zhiqin Xie, Liji Fan, Qing Luo, Sisi Liu, Jiabo Huang, Li Huang, Jiaoling Zeng, Tingting Wang, Sheng |
author_facet | Zhang, Yanfang Xie, Zhixun Deng, Xianwen Xie, Zhiqin Xie, Liji Fan, Qing Luo, Sisi Liu, Jiabo Huang, Li Huang, Jiaoling Zeng, Tingting Wang, Sheng |
author_sort | Zhang, Yanfang |
collection | PubMed |
description | The objective of this study was to obtain the complete mitochondrial DNA sequence of chukar partridge, and to provide reference data for protection and utilization of these resources of chukar partridge. The complete mitochondrial genome sequence of the China chukar partridge was measured by PCR-based methods and analysed in detail. Our research findings reveal that the entire mitochondrial genome of the chukar partridge is a circular molecule consisting of 16,688 bp (GenBank accession number: KY829450). The contents of A, T, C, and G in the mitochondrial genome were found to be 30.44%, 24.43%, 31.57%, and 13.56%, respectively. The complete mitochondrial genome of the chukar partridge has a typical structure, including 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and one control region (D-loop region). This complete mitochondrial genome sequence provides essential information in understanding phylogenetic relationships among Galliformes mitochondrial genomes. |
format | Online Article Text |
id | pubmed-7800480 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78004802021-01-19 Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome Zhang, Yanfang Xie, Zhixun Deng, Xianwen Xie, Zhiqin Xie, Liji Fan, Qing Luo, Sisi Liu, Jiabo Huang, Li Huang, Jiaoling Zeng, Tingting Wang, Sheng Mitochondrial DNA B Resour Mitogenome Announcement The objective of this study was to obtain the complete mitochondrial DNA sequence of chukar partridge, and to provide reference data for protection and utilization of these resources of chukar partridge. The complete mitochondrial genome sequence of the China chukar partridge was measured by PCR-based methods and analysed in detail. Our research findings reveal that the entire mitochondrial genome of the chukar partridge is a circular molecule consisting of 16,688 bp (GenBank accession number: KY829450). The contents of A, T, C, and G in the mitochondrial genome were found to be 30.44%, 24.43%, 31.57%, and 13.56%, respectively. The complete mitochondrial genome of the chukar partridge has a typical structure, including 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and one control region (D-loop region). This complete mitochondrial genome sequence provides essential information in understanding phylogenetic relationships among Galliformes mitochondrial genomes. Taylor & Francis 2017-06-16 /pmc/articles/PMC7800480/ /pubmed/33473828 http://dx.doi.org/10.1080/23802359.2017.1339215 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Zhang, Yanfang Xie, Zhixun Deng, Xianwen Xie, Zhiqin Xie, Liji Fan, Qing Luo, Sisi Liu, Jiabo Huang, Li Huang, Jiaoling Zeng, Tingting Wang, Sheng Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome |
title | Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome |
title_full | Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome |
title_fullStr | Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome |
title_full_unstemmed | Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome |
title_short | Complete sequence cloning and bioinformatics analysis of the chukar partridge (Alectoris chukar, Aves, Galliformes) in Guangxi base on mitochondrial genome |
title_sort | complete sequence cloning and bioinformatics analysis of the chukar partridge (alectoris chukar, aves, galliformes) in guangxi base on mitochondrial genome |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800480/ https://www.ncbi.nlm.nih.gov/pubmed/33473828 http://dx.doi.org/10.1080/23802359.2017.1339215 |
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