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The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae)
The complete mitochondrial genome of Matuta planipes was obtained using long and conventional PCR method. The circular genome was 15,760 bp in length, consisting of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a control region. Of the 37 genes, 23 were encoded by the hea...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800499/ https://www.ncbi.nlm.nih.gov/pubmed/33474103 http://dx.doi.org/10.1080/23802359.2018.1437802 |
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author | Lin, Fan Tan, Huaqiang Fazhan, Hanafiah Xie, Zhuofang Guan, Mengyun Shi, Xi Ma, Hongyu |
author_facet | Lin, Fan Tan, Huaqiang Fazhan, Hanafiah Xie, Zhuofang Guan, Mengyun Shi, Xi Ma, Hongyu |
author_sort | Lin, Fan |
collection | PubMed |
description | The complete mitochondrial genome of Matuta planipes was obtained using long and conventional PCR method. The circular genome was 15,760 bp in length, consisting of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a control region. Of the 37 genes, 23 were encoded by the heavy strand, while the others were encoded by the light strand. The genome composition with A + T bias (70.82%) and gene arrangement were largely identical to those observed in most arthropods, such as the mud crab (Scylla paramamosain). The phylogenetic analysis suggested that M. planipes was closest to Ashtoret lunaris. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Matutidae. |
format | Online Article Text |
id | pubmed-7800499 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78004992021-01-19 The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) Lin, Fan Tan, Huaqiang Fazhan, Hanafiah Xie, Zhuofang Guan, Mengyun Shi, Xi Ma, Hongyu Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Matuta planipes was obtained using long and conventional PCR method. The circular genome was 15,760 bp in length, consisting of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a control region. Of the 37 genes, 23 were encoded by the heavy strand, while the others were encoded by the light strand. The genome composition with A + T bias (70.82%) and gene arrangement were largely identical to those observed in most arthropods, such as the mud crab (Scylla paramamosain). The phylogenetic analysis suggested that M. planipes was closest to Ashtoret lunaris. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Matutidae. Taylor & Francis 2018-02-07 /pmc/articles/PMC7800499/ /pubmed/33474103 http://dx.doi.org/10.1080/23802359.2018.1437802 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Lin, Fan Tan, Huaqiang Fazhan, Hanafiah Xie, Zhuofang Guan, Mengyun Shi, Xi Ma, Hongyu The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) |
title | The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) |
title_full | The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) |
title_fullStr | The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) |
title_full_unstemmed | The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) |
title_short | The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Brachyura: Matutidae) |
title_sort | complete mitochondrial genome and phylogenetic analysis of matuta planipes (decapoda: brachyura: matutidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800499/ https://www.ncbi.nlm.nih.gov/pubmed/33474103 http://dx.doi.org/10.1080/23802359.2018.1437802 |
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