Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis

The complete mitochondrial genome sequence of Atergatis integerrimus from China has been amplified and sequenced in this study. The mitogenome assembly was found to be 15,924 bp in length with base composition of A (32.88%), G (10.58%), C (20.87%), T (35.66%), A + T (68.54%), and G + C (31.46%). It...

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Autores principales: Xie, Zhuofang, Tan, Huaqiang, Lin, Fan, Guan, Mengyun, Waiho, Khor, Fang, Shaobin, Ikhwanuddin, Mhd, Fazhan, Hanafiah, Ma, Hongyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800503/
https://www.ncbi.nlm.nih.gov/pubmed/33474181
http://dx.doi.org/10.1080/23802359.2018.1456374
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author Xie, Zhuofang
Tan, Huaqiang
Lin, Fan
Guan, Mengyun
Waiho, Khor
Fang, Shaobin
Ikhwanuddin, Mhd
Fazhan, Hanafiah
Ma, Hongyu
author_facet Xie, Zhuofang
Tan, Huaqiang
Lin, Fan
Guan, Mengyun
Waiho, Khor
Fang, Shaobin
Ikhwanuddin, Mhd
Fazhan, Hanafiah
Ma, Hongyu
author_sort Xie, Zhuofang
collection PubMed
description The complete mitochondrial genome sequence of Atergatis integerrimus from China has been amplified and sequenced in this study. The mitogenome assembly was found to be 15,924 bp in length with base composition of A (32.88%), G (10.58%), C (20.87%), T (35.66%), A + T (68.54%), and G + C (31.46%). It contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and a control region. The phylogenetic position was constructed and the A. integerrimus was closely clustered with Pseudocarcinus gigas and Leptodius sanguineus. The complete mitochondrial genome sequence would be useful for further understanding the evolution of A. integerrimus.
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spelling pubmed-78005032021-01-19 Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis Xie, Zhuofang Tan, Huaqiang Lin, Fan Guan, Mengyun Waiho, Khor Fang, Shaobin Ikhwanuddin, Mhd Fazhan, Hanafiah Ma, Hongyu Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome sequence of Atergatis integerrimus from China has been amplified and sequenced in this study. The mitogenome assembly was found to be 15,924 bp in length with base composition of A (32.88%), G (10.58%), C (20.87%), T (35.66%), A + T (68.54%), and G + C (31.46%). It contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and a control region. The phylogenetic position was constructed and the A. integerrimus was closely clustered with Pseudocarcinus gigas and Leptodius sanguineus. The complete mitochondrial genome sequence would be useful for further understanding the evolution of A. integerrimus. Taylor & Francis 2018-03-27 /pmc/articles/PMC7800503/ /pubmed/33474181 http://dx.doi.org/10.1080/23802359.2018.1456374 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Xie, Zhuofang
Tan, Huaqiang
Lin, Fan
Guan, Mengyun
Waiho, Khor
Fang, Shaobin
Ikhwanuddin, Mhd
Fazhan, Hanafiah
Ma, Hongyu
Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
title Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
title_full Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
title_fullStr Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
title_full_unstemmed Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
title_short Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
title_sort characterization of the complete mitochondrial genome of xanthid crab, atergatis integerrimus from china (decapoda: brachyura) and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800503/
https://www.ncbi.nlm.nih.gov/pubmed/33474181
http://dx.doi.org/10.1080/23802359.2018.1456374
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