The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)

Histiopteris incisa is a core member to address the issue of relationship between Histiopteris and Pteris. Its complete chloroplast genome was generated by de novo assembly using Illumina sequencing. The complete chloroplast genome is a quadripartite structure of 16,0567 bp in length, with two inver...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Xinyao, Kang, Ziqi, Liu, Shanshan, Xu, Ruixiang, Wang, Zhen, Wang, Ting, Su, Yingjuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800508/
https://www.ncbi.nlm.nih.gov/pubmed/33474317
http://dx.doi.org/10.1080/23802359.2018.1491344
_version_ 1783635370808705024
author Sun, Xinyao
Kang, Ziqi
Liu, Shanshan
Xu, Ruixiang
Wang, Zhen
Wang, Ting
Su, Yingjuan
author_facet Sun, Xinyao
Kang, Ziqi
Liu, Shanshan
Xu, Ruixiang
Wang, Zhen
Wang, Ting
Su, Yingjuan
author_sort Sun, Xinyao
collection PubMed
description Histiopteris incisa is a core member to address the issue of relationship between Histiopteris and Pteris. Its complete chloroplast genome was generated by de novo assembly using Illumina sequencing. The complete chloroplast genome is a quadripartite structure of 16,0567 bp in length, with two inverted repeat regions (IRs) of 27,119 bp each, a large single-copy (LSC) region of 84,897 bp and a small single-copy (SSC) region of 21,432 bp. A total of 132 genes were predicted, involving in 88 protein-coding genes, eight rRNA genes, 35 tRNA genes, and one pseudogene. ML phylogenetic analysis showed that H. incisa was closely related to Pteridium aquilinum subsp. aquilinum.
format Online
Article
Text
id pubmed-7800508
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78005082021-01-19 The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) Sun, Xinyao Kang, Ziqi Liu, Shanshan Xu, Ruixiang Wang, Zhen Wang, Ting Su, Yingjuan Mitochondrial DNA B Resour Mitogenome Announcement Histiopteris incisa is a core member to address the issue of relationship between Histiopteris and Pteris. Its complete chloroplast genome was generated by de novo assembly using Illumina sequencing. The complete chloroplast genome is a quadripartite structure of 16,0567 bp in length, with two inverted repeat regions (IRs) of 27,119 bp each, a large single-copy (LSC) region of 84,897 bp and a small single-copy (SSC) region of 21,432 bp. A total of 132 genes were predicted, involving in 88 protein-coding genes, eight rRNA genes, 35 tRNA genes, and one pseudogene. ML phylogenetic analysis showed that H. incisa was closely related to Pteridium aquilinum subsp. aquilinum. Taylor & Francis 2018-07-11 /pmc/articles/PMC7800508/ /pubmed/33474317 http://dx.doi.org/10.1080/23802359.2018.1491344 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Sun, Xinyao
Kang, Ziqi
Liu, Shanshan
Xu, Ruixiang
Wang, Zhen
Wang, Ting
Su, Yingjuan
The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
title The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
title_full The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
title_fullStr The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
title_short The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
title_sort complete chloroplast genome sequence of histiopteris incisa (dennstaedtiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800508/
https://www.ncbi.nlm.nih.gov/pubmed/33474317
http://dx.doi.org/10.1080/23802359.2018.1491344
work_keys_str_mv AT sunxinyao thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT kangziqi thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT liushanshan thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT xuruixiang thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT wangzhen thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT wangting thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT suyingjuan thecompletechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT sunxinyao completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT kangziqi completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT liushanshan completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT xuruixiang completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT wangzhen completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT wangting completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae
AT suyingjuan completechloroplastgenomesequenceofhistiopterisincisadennstaedtiaceae

Ejemplares similares