Cargando…
The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae)
The complete mitchondrial genome of Echiniscus testudo, a cosmopolitan heterotardigrade collected in Japan, has been sequenced using a single molecule real-time (SMRT) sequencing long read after whole genome amplification from a single individual. The genome has a total length of 15,817 bp, consisti...
Autor principal: | |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800542/ https://www.ncbi.nlm.nih.gov/pubmed/33474331 http://dx.doi.org/10.1080/23802359.2018.1495118 |
_version_ | 1783635378922586112 |
---|---|
author | Arakawa, Kazuharu |
author_facet | Arakawa, Kazuharu |
author_sort | Arakawa, Kazuharu |
collection | PubMed |
description | The complete mitchondrial genome of Echiniscus testudo, a cosmopolitan heterotardigrade collected in Japan, has been sequenced using a single molecule real-time (SMRT) sequencing long read after whole genome amplification from a single individual. The genome has a total length of 15,817 bp, consisting of 13 protein-coding genes, 20 tRNA, 2 rRNA genes, and an AT-rich control region. The nucleotide composition was extremely AT-rich, with 78.41% AT. Being in a different class of the phylum Tardigrada, there is a large sequence divergence from the previously reported mitochondrial genome of the eutardigrade Ramazzottius varieornatus, but the gene order of protein-coding genes are mostly conserved. This is the first report of a complete mitochondrial genome of a heterotardigrade. |
format | Online Article Text |
id | pubmed-7800542 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78005422021-01-19 The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) Arakawa, Kazuharu Mitochondrial DNA B Resour Mitogenome Announcement The complete mitchondrial genome of Echiniscus testudo, a cosmopolitan heterotardigrade collected in Japan, has been sequenced using a single molecule real-time (SMRT) sequencing long read after whole genome amplification from a single individual. The genome has a total length of 15,817 bp, consisting of 13 protein-coding genes, 20 tRNA, 2 rRNA genes, and an AT-rich control region. The nucleotide composition was extremely AT-rich, with 78.41% AT. Being in a different class of the phylum Tardigrada, there is a large sequence divergence from the previously reported mitochondrial genome of the eutardigrade Ramazzottius varieornatus, but the gene order of protein-coding genes are mostly conserved. This is the first report of a complete mitochondrial genome of a heterotardigrade. Taylor & Francis 2018-08-01 /pmc/articles/PMC7800542/ /pubmed/33474331 http://dx.doi.org/10.1080/23802359.2018.1495118 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Arakawa, Kazuharu The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) |
title | The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) |
title_full | The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) |
title_fullStr | The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) |
title_full_unstemmed | The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) |
title_short | The complete mitochondrial genome of Echiniscus testudo (Heterotardigrada: Echiniscidae) |
title_sort | complete mitochondrial genome of echiniscus testudo (heterotardigrada: echiniscidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800542/ https://www.ncbi.nlm.nih.gov/pubmed/33474331 http://dx.doi.org/10.1080/23802359.2018.1495118 |
work_keys_str_mv | AT arakawakazuharu thecompletemitochondrialgenomeofechiniscustestudoheterotardigradaechiniscidae AT arakawakazuharu completemitochondrialgenomeofechiniscustestudoheterotardigradaechiniscidae |