Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)

The complete mitochondrial genome of Elaphe carinata was sequenced and analysed using muscle tissue for the first time. The genome is 17 154 bp in length. The complete mitochondrial genome contains 22 tRNA genes, 13 protein-coding genes (PCGs), two rRNA genes, two control regions (CRI and CRII) and...

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Autores principales: Ding, Changhong, Zhou, Bo, Guo, Hui, Duan, Yunbao, Wang, Zhenyue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800545/
https://www.ncbi.nlm.nih.gov/pubmed/33473400
http://dx.doi.org/10.1080/23802359.2015.1137813
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author Ding, Changhong
Zhou, Bo
Guo, Hui
Duan, Yunbao
Wang, Zhenyue
author_facet Ding, Changhong
Zhou, Bo
Guo, Hui
Duan, Yunbao
Wang, Zhenyue
author_sort Ding, Changhong
collection PubMed
description The complete mitochondrial genome of Elaphe carinata was sequenced and analysed using muscle tissue for the first time. The genome is 17 154 bp in length. The complete mitochondrial genome contains 22 tRNA genes, 13 protein-coding genes (PCGs), two rRNA genes, two control regions (CRI and CRII) and one putative origin of L-strand replication. The gene order and nucleotide composition of E. carinata are very similar with E. davidi, E. schrenckii, E. anomala and E. bimaculata. A phylogenetic tree of mitochondrial genomes analyses of 16 species snakes of Colubridae was made based on the Neighbour-Joining (NJ) method, E. carinata has the most closely relationship with E. davidi, while E. poryphyracea and Euprepiophis perlacea are special species.
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spelling pubmed-78005452021-01-19 Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae) Ding, Changhong Zhou, Bo Guo, Hui Duan, Yunbao Wang, Zhenyue Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Elaphe carinata was sequenced and analysed using muscle tissue for the first time. The genome is 17 154 bp in length. The complete mitochondrial genome contains 22 tRNA genes, 13 protein-coding genes (PCGs), two rRNA genes, two control regions (CRI and CRII) and one putative origin of L-strand replication. The gene order and nucleotide composition of E. carinata are very similar with E. davidi, E. schrenckii, E. anomala and E. bimaculata. A phylogenetic tree of mitochondrial genomes analyses of 16 species snakes of Colubridae was made based on the Neighbour-Joining (NJ) method, E. carinata has the most closely relationship with E. davidi, while E. poryphyracea and Euprepiophis perlacea are special species. Taylor & Francis 2016-02-01 /pmc/articles/PMC7800545/ /pubmed/33473400 http://dx.doi.org/10.1080/23802359.2015.1137813 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Ding, Changhong
Zhou, Bo
Guo, Hui
Duan, Yunbao
Wang, Zhenyue
Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)
title Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)
title_full Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)
title_fullStr Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)
title_full_unstemmed Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)
title_short Sequencing and analysis of mitochondrial genome of Elaphe carinata (Reptilia, Squamata, Colubridae)
title_sort sequencing and analysis of mitochondrial genome of elaphe carinata (reptilia, squamata, colubridae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800545/
https://www.ncbi.nlm.nih.gov/pubmed/33473400
http://dx.doi.org/10.1080/23802359.2015.1137813
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