DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods

The changes of coastal topography might have genetically altered the extant species diversity in Chilika Lake. The genetic assessment of stomatopods has never been attempted from this ecosystem. The study generate the first genetic information (mtCOI) of Cloridopsis immaculata. DNA sequences of C. i...

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Autores principales: Kundu, Shantanu, Rath, Shibananda, Tyagi, Kaomud, Chakraborty, Rajasree, Pakrashi, Avas, Kumar, Vikas, Chandra, Kailash
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mito Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800632/
https://www.ncbi.nlm.nih.gov/pubmed/33474378
http://dx.doi.org/10.1080/23802359.2018.1507632
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author Kundu, Shantanu
Rath, Shibananda
Tyagi, Kaomud
Chakraborty, Rajasree
Pakrashi, Avas
Kumar, Vikas
Chandra, Kailash
author_facet Kundu, Shantanu
Rath, Shibananda
Tyagi, Kaomud
Chakraborty, Rajasree
Pakrashi, Avas
Kumar, Vikas
Chandra, Kailash
author_sort Kundu, Shantanu
collection PubMed
description The changes of coastal topography might have genetically altered the extant species diversity in Chilika Lake. The genetic assessment of stomatopods has never been attempted from this ecosystem. The study generate the first genetic information (mtCOI) of Cloridopsis immaculata. DNA sequences of C. immaculata shows 12.9% genetic divergence with Harpiosquilla harpax and clade as sister species in NJ tree. Alima, Harpiosquilla, and Oratosquilla shows high congeneric/conspecific genetic divergence (20.9%, 15.7%, and 7.2%) and cladded separately in the phylogeny; correlate to their diverse populations. We recommend more extensive survey of stomatopods and generation of molecular data to resolve the taxonomic uncertainty.
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spelling pubmed-78006322021-01-19 DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods Kundu, Shantanu Rath, Shibananda Tyagi, Kaomud Chakraborty, Rajasree Pakrashi, Avas Kumar, Vikas Chandra, Kailash Mitochondrial DNA B Resour Mito Communication The changes of coastal topography might have genetically altered the extant species diversity in Chilika Lake. The genetic assessment of stomatopods has never been attempted from this ecosystem. The study generate the first genetic information (mtCOI) of Cloridopsis immaculata. DNA sequences of C. immaculata shows 12.9% genetic divergence with Harpiosquilla harpax and clade as sister species in NJ tree. Alima, Harpiosquilla, and Oratosquilla shows high congeneric/conspecific genetic divergence (20.9%, 15.7%, and 7.2%) and cladded separately in the phylogeny; correlate to their diverse populations. We recommend more extensive survey of stomatopods and generation of molecular data to resolve the taxonomic uncertainty. Taylor & Francis 2018-09-10 /pmc/articles/PMC7800632/ /pubmed/33474378 http://dx.doi.org/10.1080/23802359.2018.1507632 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mito Communication
Kundu, Shantanu
Rath, Shibananda
Tyagi, Kaomud
Chakraborty, Rajasree
Pakrashi, Avas
Kumar, Vikas
Chandra, Kailash
DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
title DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
title_full DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
title_fullStr DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
title_full_unstemmed DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
title_short DNA barcoding of Cloridopsis immaculata: genetic distance and phylogeny of stomatopods
title_sort dna barcoding of cloridopsis immaculata: genetic distance and phylogeny of stomatopods
topic Mito Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800632/
https://www.ncbi.nlm.nih.gov/pubmed/33474378
http://dx.doi.org/10.1080/23802359.2018.1507632
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