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The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis

The complete mitochondrial genome sequence of the suspected new species (Pelteobagrus olimcorporis sp.nov) was first determined by a PCR-based sequencing method in this study. The complete mtDNA genome of this suspected new species is 16,533 bp in length and consists of 13 protein-coding genes, 22 t...

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Autores principales: Li, Sha, Liu, Xueqing, Jiang, Wei, Bai, Yunqin, Huang, Tao, Wang, Junhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800642/
https://www.ncbi.nlm.nih.gov/pubmed/33473574
http://dx.doi.org/10.1080/23802359.2016.1214544
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author Li, Sha
Liu, Xueqing
Jiang, Wei
Bai, Yunqin
Huang, Tao
Wang, Junhong
author_facet Li, Sha
Liu, Xueqing
Jiang, Wei
Bai, Yunqin
Huang, Tao
Wang, Junhong
author_sort Li, Sha
collection PubMed
description The complete mitochondrial genome sequence of the suspected new species (Pelteobagrus olimcorporis sp.nov) was first determined by a PCR-based sequencing method in this study. The complete mtDNA genome of this suspected new species is 16,533 bp in length and consists of 13 protein-coding genes, 22 transfer RNA genes (tRNA), two ribosomal RNA genes (rRNA) and a non-coding control region (D-loop). Compared with the 13 proteins genome of the Bagridae and Cyprinidae, results showed that this suspected new species was clustered together and from a sister group with fishes of Bagridae. Blasting the special region on NCBI, we found 99% of the sequence was the same with Pseudolaubuca sinensis. It indicated that P. olimcorporis sp.nov is a hybrid and the mitochondrial genomes of the father may permeate to the hybrid.
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spelling pubmed-78006422021-01-19 The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis Li, Sha Liu, Xueqing Jiang, Wei Bai, Yunqin Huang, Tao Wang, Junhong Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome sequence of the suspected new species (Pelteobagrus olimcorporis sp.nov) was first determined by a PCR-based sequencing method in this study. The complete mtDNA genome of this suspected new species is 16,533 bp in length and consists of 13 protein-coding genes, 22 transfer RNA genes (tRNA), two ribosomal RNA genes (rRNA) and a non-coding control region (D-loop). Compared with the 13 proteins genome of the Bagridae and Cyprinidae, results showed that this suspected new species was clustered together and from a sister group with fishes of Bagridae. Blasting the special region on NCBI, we found 99% of the sequence was the same with Pseudolaubuca sinensis. It indicated that P. olimcorporis sp.nov is a hybrid and the mitochondrial genomes of the father may permeate to the hybrid. Taylor & Francis 2016-09-05 /pmc/articles/PMC7800642/ /pubmed/33473574 http://dx.doi.org/10.1080/23802359.2016.1214544 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Sha
Liu, Xueqing
Jiang, Wei
Bai, Yunqin
Huang, Tao
Wang, Junhong
The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
title The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
title_full The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
title_fullStr The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
title_full_unstemmed The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
title_short The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
title_sort complete mtdna genome of suspected natural bagridae hybridization (pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800642/
https://www.ncbi.nlm.nih.gov/pubmed/33473574
http://dx.doi.org/10.1080/23802359.2016.1214544
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