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The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis
The complete mitochondrial genome sequence of the suspected new species (Pelteobagrus olimcorporis sp.nov) was first determined by a PCR-based sequencing method in this study. The complete mtDNA genome of this suspected new species is 16,533 bp in length and consists of 13 protein-coding genes, 22 t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800642/ https://www.ncbi.nlm.nih.gov/pubmed/33473574 http://dx.doi.org/10.1080/23802359.2016.1214544 |
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author | Li, Sha Liu, Xueqing Jiang, Wei Bai, Yunqin Huang, Tao Wang, Junhong |
author_facet | Li, Sha Liu, Xueqing Jiang, Wei Bai, Yunqin Huang, Tao Wang, Junhong |
author_sort | Li, Sha |
collection | PubMed |
description | The complete mitochondrial genome sequence of the suspected new species (Pelteobagrus olimcorporis sp.nov) was first determined by a PCR-based sequencing method in this study. The complete mtDNA genome of this suspected new species is 16,533 bp in length and consists of 13 protein-coding genes, 22 transfer RNA genes (tRNA), two ribosomal RNA genes (rRNA) and a non-coding control region (D-loop). Compared with the 13 proteins genome of the Bagridae and Cyprinidae, results showed that this suspected new species was clustered together and from a sister group with fishes of Bagridae. Blasting the special region on NCBI, we found 99% of the sequence was the same with Pseudolaubuca sinensis. It indicated that P. olimcorporis sp.nov is a hybrid and the mitochondrial genomes of the father may permeate to the hybrid. |
format | Online Article Text |
id | pubmed-7800642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78006422021-01-19 The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis Li, Sha Liu, Xueqing Jiang, Wei Bai, Yunqin Huang, Tao Wang, Junhong Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome sequence of the suspected new species (Pelteobagrus olimcorporis sp.nov) was first determined by a PCR-based sequencing method in this study. The complete mtDNA genome of this suspected new species is 16,533 bp in length and consists of 13 protein-coding genes, 22 transfer RNA genes (tRNA), two ribosomal RNA genes (rRNA) and a non-coding control region (D-loop). Compared with the 13 proteins genome of the Bagridae and Cyprinidae, results showed that this suspected new species was clustered together and from a sister group with fishes of Bagridae. Blasting the special region on NCBI, we found 99% of the sequence was the same with Pseudolaubuca sinensis. It indicated that P. olimcorporis sp.nov is a hybrid and the mitochondrial genomes of the father may permeate to the hybrid. Taylor & Francis 2016-09-05 /pmc/articles/PMC7800642/ /pubmed/33473574 http://dx.doi.org/10.1080/23802359.2016.1214544 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Sha Liu, Xueqing Jiang, Wei Bai, Yunqin Huang, Tao Wang, Junhong The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
title | The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
title_full | The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
title_fullStr | The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
title_full_unstemmed | The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
title_short | The complete mtDNA genome of suspected natural Bagridae hybridization (Pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
title_sort | complete mtdna genome of suspected natural bagridae hybridization (pelteobagrus olimcorporis sp.nov): genome characterization and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800642/ https://www.ncbi.nlm.nih.gov/pubmed/33473574 http://dx.doi.org/10.1080/23802359.2016.1214544 |
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