Cargando…

The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis

Triplophysa lewanggensis revealed that the complete length of its mitochondrial genome was 16,568 bp, composed of A (31.7%), T (27.1%), G (15.9%), C (25.4%), and A + T (58.8%). Its genetic constitution and arrangement were consistent with other Triplophysa, including 13 protein-coding genes, 22 tRNA...

Descripción completa

Detalles Bibliográficos
Autores principales: Deng, Huaiqing, Wen, Huamei, Xiao, Ning, Zhou, Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800681/
https://www.ncbi.nlm.nih.gov/pubmed/33473564
http://dx.doi.org/10.1080/23802359.2016.1202740
_version_ 1783635411032080384
author Deng, Huaiqing
Wen, Huamei
Xiao, Ning
Zhou, Jiang
author_facet Deng, Huaiqing
Wen, Huamei
Xiao, Ning
Zhou, Jiang
author_sort Deng, Huaiqing
collection PubMed
description Triplophysa lewanggensis revealed that the complete length of its mitochondrial genome was 16,568 bp, composed of A (31.7%), T (27.1%), G (15.9%), C (25.4%), and A + T (58.8%). Its genetic constitution and arrangement were consistent with other Triplophysa, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control area (D-loop). All genes were encoded by the H-strand, except for one protein-coding gene (ND6) and eight tRNA genes (tRNA(Gln), tRNA(Ala), tRNA(Cys), tRNA(Asn), tRNA(Tyr), tRNA(Ser(UCN)), tRNA(Glu), tRNA(Pro)) are encoded by the L chain, and the remaining genes are encoded by the H chain. The phylogenetic tree was divided into two main clades: one just including Triplophysa and the other including Oreonectes, Homatula, Schistura, Nemacheilus, Traccatichthys. T. lewanggensis is distributed in Southwest Guizhou Province attached to Yunnan–Guizhou Plateau, T. xiangxiensis is distributed in Hunan Province, they are near relatives, but their kinship with Triplophysa distributed in Tibetan Plateau is farther.
format Online
Article
Text
id pubmed-7800681
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-78006812021-01-19 The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang Mitochondrial DNA B Resour Mitogenome Announcement Triplophysa lewanggensis revealed that the complete length of its mitochondrial genome was 16,568 bp, composed of A (31.7%), T (27.1%), G (15.9%), C (25.4%), and A + T (58.8%). Its genetic constitution and arrangement were consistent with other Triplophysa, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control area (D-loop). All genes were encoded by the H-strand, except for one protein-coding gene (ND6) and eight tRNA genes (tRNA(Gln), tRNA(Ala), tRNA(Cys), tRNA(Asn), tRNA(Tyr), tRNA(Ser(UCN)), tRNA(Glu), tRNA(Pro)) are encoded by the L chain, and the remaining genes are encoded by the H chain. The phylogenetic tree was divided into two main clades: one just including Triplophysa and the other including Oreonectes, Homatula, Schistura, Nemacheilus, Traccatichthys. T. lewanggensis is distributed in Southwest Guizhou Province attached to Yunnan–Guizhou Plateau, T. xiangxiensis is distributed in Hunan Province, they are near relatives, but their kinship with Triplophysa distributed in Tibetan Plateau is farther. Taylor & Francis 2016-08-31 /pmc/articles/PMC7800681/ /pubmed/33473564 http://dx.doi.org/10.1080/23802359.2016.1202740 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Deng, Huaiqing
Wen, Huamei
Xiao, Ning
Zhou, Jiang
The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
title The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
title_full The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
title_fullStr The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
title_full_unstemmed The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
title_short The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
title_sort analysis for mitochondrial genome sequencing of triplophysa lewanggensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800681/
https://www.ncbi.nlm.nih.gov/pubmed/33473564
http://dx.doi.org/10.1080/23802359.2016.1202740
work_keys_str_mv AT denghuaiqing theanalysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT wenhuamei theanalysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT xiaoning theanalysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT zhoujiang theanalysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT denghuaiqing analysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT wenhuamei analysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT xiaoning analysisformitochondrialgenomesequencingoftriplophysalewanggensis
AT zhoujiang analysisformitochondrialgenomesequencingoftriplophysalewanggensis