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The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis
Triplophysa lewanggensis revealed that the complete length of its mitochondrial genome was 16,568 bp, composed of A (31.7%), T (27.1%), G (15.9%), C (25.4%), and A + T (58.8%). Its genetic constitution and arrangement were consistent with other Triplophysa, including 13 protein-coding genes, 22 tRNA...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800681/ https://www.ncbi.nlm.nih.gov/pubmed/33473564 http://dx.doi.org/10.1080/23802359.2016.1202740 |
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author | Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang |
author_facet | Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang |
author_sort | Deng, Huaiqing |
collection | PubMed |
description | Triplophysa lewanggensis revealed that the complete length of its mitochondrial genome was 16,568 bp, composed of A (31.7%), T (27.1%), G (15.9%), C (25.4%), and A + T (58.8%). Its genetic constitution and arrangement were consistent with other Triplophysa, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control area (D-loop). All genes were encoded by the H-strand, except for one protein-coding gene (ND6) and eight tRNA genes (tRNA(Gln), tRNA(Ala), tRNA(Cys), tRNA(Asn), tRNA(Tyr), tRNA(Ser(UCN)), tRNA(Glu), tRNA(Pro)) are encoded by the L chain, and the remaining genes are encoded by the H chain. The phylogenetic tree was divided into two main clades: one just including Triplophysa and the other including Oreonectes, Homatula, Schistura, Nemacheilus, Traccatichthys. T. lewanggensis is distributed in Southwest Guizhou Province attached to Yunnan–Guizhou Plateau, T. xiangxiensis is distributed in Hunan Province, they are near relatives, but their kinship with Triplophysa distributed in Tibetan Plateau is farther. |
format | Online Article Text |
id | pubmed-7800681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78006812021-01-19 The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang Mitochondrial DNA B Resour Mitogenome Announcement Triplophysa lewanggensis revealed that the complete length of its mitochondrial genome was 16,568 bp, composed of A (31.7%), T (27.1%), G (15.9%), C (25.4%), and A + T (58.8%). Its genetic constitution and arrangement were consistent with other Triplophysa, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control area (D-loop). All genes were encoded by the H-strand, except for one protein-coding gene (ND6) and eight tRNA genes (tRNA(Gln), tRNA(Ala), tRNA(Cys), tRNA(Asn), tRNA(Tyr), tRNA(Ser(UCN)), tRNA(Glu), tRNA(Pro)) are encoded by the L chain, and the remaining genes are encoded by the H chain. The phylogenetic tree was divided into two main clades: one just including Triplophysa and the other including Oreonectes, Homatula, Schistura, Nemacheilus, Traccatichthys. T. lewanggensis is distributed in Southwest Guizhou Province attached to Yunnan–Guizhou Plateau, T. xiangxiensis is distributed in Hunan Province, they are near relatives, but their kinship with Triplophysa distributed in Tibetan Plateau is farther. Taylor & Francis 2016-08-31 /pmc/articles/PMC7800681/ /pubmed/33473564 http://dx.doi.org/10.1080/23802359.2016.1202740 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Deng, Huaiqing Wen, Huamei Xiao, Ning Zhou, Jiang The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis |
title | The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis |
title_full | The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis |
title_fullStr | The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis |
title_full_unstemmed | The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis |
title_short | The analysis for mitochondrial genome sequencing of Triplophysa lewanggensis |
title_sort | analysis for mitochondrial genome sequencing of triplophysa lewanggensis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800681/ https://www.ncbi.nlm.nih.gov/pubmed/33473564 http://dx.doi.org/10.1080/23802359.2016.1202740 |
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