The complete chloroplast genome of Cnidium officinale Makino

Cnidium officinale (Ligusticum officinale) is an important herbal medicine. To facilitate species identification, we determined the complete chloroplast genome of C. officinale using the Illumina MiSeq platform. The genome was 148,518 bp in length, comprising a large single copy (LSC) region of 93,9...

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Autores principales: Park, Inkyu, Yang, Sungyu, Kim, Wook Jin, Noh, Pureum, Lee, Hyun Oh, Moon, Byeong Cheol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800684/
https://www.ncbi.nlm.nih.gov/pubmed/33474215
http://dx.doi.org/10.1080/23802359.2018.1464413
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author Park, Inkyu
Yang, Sungyu
Kim, Wook Jin
Noh, Pureum
Lee, Hyun Oh
Moon, Byeong Cheol
author_facet Park, Inkyu
Yang, Sungyu
Kim, Wook Jin
Noh, Pureum
Lee, Hyun Oh
Moon, Byeong Cheol
author_sort Park, Inkyu
collection PubMed
description Cnidium officinale (Ligusticum officinale) is an important herbal medicine. To facilitate species identification, we determined the complete chloroplast genome of C. officinale using the Illumina MiSeq platform. The genome was 148,518 bp in length, comprising a large single copy (LSC) region of 93,977 bp, a small single copy (SSC) region of 17,607 bp, and two inverted repeat regions (IRa and IRb) of 18,467 bp each. The genome contains 113 unique genes, including 79 protein-coding genes, four ribosomal RNAs (rRNAs), and 30 transfer RNAs (tRNAs). Phylogenetic analysis revealed that C. officinale is most closely related to L. tenuissium, with high bootstrap values.
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spelling pubmed-78006842021-01-19 The complete chloroplast genome of Cnidium officinale Makino Park, Inkyu Yang, Sungyu Kim, Wook Jin Noh, Pureum Lee, Hyun Oh Moon, Byeong Cheol Mitochondrial DNA B Resour Mitogenome Announcement Cnidium officinale (Ligusticum officinale) is an important herbal medicine. To facilitate species identification, we determined the complete chloroplast genome of C. officinale using the Illumina MiSeq platform. The genome was 148,518 bp in length, comprising a large single copy (LSC) region of 93,977 bp, a small single copy (SSC) region of 17,607 bp, and two inverted repeat regions (IRa and IRb) of 18,467 bp each. The genome contains 113 unique genes, including 79 protein-coding genes, four ribosomal RNAs (rRNAs), and 30 transfer RNAs (tRNAs). Phylogenetic analysis revealed that C. officinale is most closely related to L. tenuissium, with high bootstrap values. Taylor & Francis 2018-04-23 /pmc/articles/PMC7800684/ /pubmed/33474215 http://dx.doi.org/10.1080/23802359.2018.1464413 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Park, Inkyu
Yang, Sungyu
Kim, Wook Jin
Noh, Pureum
Lee, Hyun Oh
Moon, Byeong Cheol
The complete chloroplast genome of Cnidium officinale Makino
title The complete chloroplast genome of Cnidium officinale Makino
title_full The complete chloroplast genome of Cnidium officinale Makino
title_fullStr The complete chloroplast genome of Cnidium officinale Makino
title_full_unstemmed The complete chloroplast genome of Cnidium officinale Makino
title_short The complete chloroplast genome of Cnidium officinale Makino
title_sort complete chloroplast genome of cnidium officinale makino
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800684/
https://www.ncbi.nlm.nih.gov/pubmed/33474215
http://dx.doi.org/10.1080/23802359.2018.1464413
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