Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)

In this study, the complete mitogenome sequence of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae), has been decoded for the first time by low-coverage genome-sequencing method. The overall base composition of C. quadricolor mitogenome is 30.6% for A, 14.4% for C, 17.8% for G and 37...

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Autores principales: Xiang, Peng, Lin, Mao, Zhao, Liyuan, Shen, Kang-Ning, Hsiao, Chung-Der
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800696/
https://www.ncbi.nlm.nih.gov/pubmed/33473422
http://dx.doi.org/10.1080/23802359.2015.1137841
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author Xiang, Peng
Lin, Mao
Zhao, Liyuan
Shen, Kang-Ning
Hsiao, Chung-Der
author_facet Xiang, Peng
Lin, Mao
Zhao, Liyuan
Shen, Kang-Ning
Hsiao, Chung-Der
author_sort Xiang, Peng
collection PubMed
description In this study, the complete mitogenome sequence of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae), has been decoded for the first time by low-coverage genome-sequencing method. The overall base composition of C. quadricolor mitogenome is 30.6% for A, 14.4% for C, 17.8% for G and 37.2% for T and has low GC content of 32.2%. The assembled mitogenome, consisting of 14 259 bp, has unique 13 protein-coding genes (PCGs), 22 transfer RNAs and two ribosomal RNAs genes. The C. quadricolor mitogenome has the common mitogenome gene organization and feature of Nudipleura (a clade of sea slugs and sea snails). The complete mitogenome provides essential and important DNA molecular data for further evolutionary analysis for sea slugs and sea snails.
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spelling pubmed-78006962021-01-19 Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae) Xiang, Peng Lin, Mao Zhao, Liyuan Shen, Kang-Ning Hsiao, Chung-Der Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitogenome sequence of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae), has been decoded for the first time by low-coverage genome-sequencing method. The overall base composition of C. quadricolor mitogenome is 30.6% for A, 14.4% for C, 17.8% for G and 37.2% for T and has low GC content of 32.2%. The assembled mitogenome, consisting of 14 259 bp, has unique 13 protein-coding genes (PCGs), 22 transfer RNAs and two ribosomal RNAs genes. The C. quadricolor mitogenome has the common mitogenome gene organization and feature of Nudipleura (a clade of sea slugs and sea snails). The complete mitogenome provides essential and important DNA molecular data for further evolutionary analysis for sea slugs and sea snails. Taylor & Francis 2016-02-01 /pmc/articles/PMC7800696/ /pubmed/33473422 http://dx.doi.org/10.1080/23802359.2015.1137841 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Xiang, Peng
Lin, Mao
Zhao, Liyuan
Shen, Kang-Ning
Hsiao, Chung-Der
Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)
title Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)
title_full Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)
title_fullStr Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)
title_full_unstemmed Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)
title_short Low-coverage genome sequencing yields the complete mitogenome of Pyjama Slug, Chromodoris quadricolor (Mollusca: Chromodorididae)
title_sort low-coverage genome sequencing yields the complete mitogenome of pyjama slug, chromodoris quadricolor (mollusca: chromodorididae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800696/
https://www.ncbi.nlm.nih.gov/pubmed/33473422
http://dx.doi.org/10.1080/23802359.2015.1137841
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