Characterization of the complete chloroplast genome sequence of Cecropia pachystachya

The complete chloroplast genome of Cecropia pachystachya Trécul was determined in this study. The total genome size was 153,925 bp in length, containing a pair of inverted repeats (IRs) of 25,443 bp, which were separated by large single copy (LSC) and small single copy (SSC) of 84,947 bp and 18,092 ...

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Autores principales: Wu, Zeng-Yuan, Du, Xin-Yu, Milne, Richard I., Liu, Jie, Li, De-Zhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800727/
https://www.ncbi.nlm.nih.gov/pubmed/33473963
http://dx.doi.org/10.1080/23802359.2017.1390420
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author Wu, Zeng-Yuan
Du, Xin-Yu
Milne, Richard I.
Liu, Jie
Li, De-Zhu
author_facet Wu, Zeng-Yuan
Du, Xin-Yu
Milne, Richard I.
Liu, Jie
Li, De-Zhu
author_sort Wu, Zeng-Yuan
collection PubMed
description The complete chloroplast genome of Cecropia pachystachya Trécul was determined in this study. The total genome size was 153,925 bp in length, containing a pair of inverted repeats (IRs) of 25,443 bp, which were separated by large single copy (LSC) and small single copy (SSC) of 84,947 bp and 18,092 bp, respectively. The GC contents is 36.5%. A total of 112 unique genes were annotated, including 30 tRNA, four rRNA, and 78 protein-coding genes. This is the first report of a cp genome for the formerly recognised family Cecropiaceae, and it confirmed that Cecropia pachystachya belongs within Urticaceae.
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spelling pubmed-78007272021-01-19 Characterization of the complete chloroplast genome sequence of Cecropia pachystachya Wu, Zeng-Yuan Du, Xin-Yu Milne, Richard I. Liu, Jie Li, De-Zhu Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Cecropia pachystachya Trécul was determined in this study. The total genome size was 153,925 bp in length, containing a pair of inverted repeats (IRs) of 25,443 bp, which were separated by large single copy (LSC) and small single copy (SSC) of 84,947 bp and 18,092 bp, respectively. The GC contents is 36.5%. A total of 112 unique genes were annotated, including 30 tRNA, four rRNA, and 78 protein-coding genes. This is the first report of a cp genome for the formerly recognised family Cecropiaceae, and it confirmed that Cecropia pachystachya belongs within Urticaceae. Taylor & Francis 2017-10-17 /pmc/articles/PMC7800727/ /pubmed/33473963 http://dx.doi.org/10.1080/23802359.2017.1390420 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Zeng-Yuan
Du, Xin-Yu
Milne, Richard I.
Liu, Jie
Li, De-Zhu
Characterization of the complete chloroplast genome sequence of Cecropia pachystachya
title Characterization of the complete chloroplast genome sequence of Cecropia pachystachya
title_full Characterization of the complete chloroplast genome sequence of Cecropia pachystachya
title_fullStr Characterization of the complete chloroplast genome sequence of Cecropia pachystachya
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Cecropia pachystachya
title_short Characterization of the complete chloroplast genome sequence of Cecropia pachystachya
title_sort characterization of the complete chloroplast genome sequence of cecropia pachystachya
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800727/
https://www.ncbi.nlm.nih.gov/pubmed/33473963
http://dx.doi.org/10.1080/23802359.2017.1390420
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