Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)

In this study, the complete mitogenome of the tigertooth croaker Otolithes ruber was first determined. This mitogenome is 16,589 bp in length, and consists of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.4% A; 29.1% C;...

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Autores principales: Guo, Chang-Chang, Liu, Min, Lin, Jian-Jie, Dai, Fang-Qun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800729/
https://www.ncbi.nlm.nih.gov/pubmed/33473742
http://dx.doi.org/10.1080/23802359.2016.1247676
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author Guo, Chang-Chang
Liu, Min
Lin, Jian-Jie
Dai, Fang-Qun
author_facet Guo, Chang-Chang
Liu, Min
Lin, Jian-Jie
Dai, Fang-Qun
author_sort Guo, Chang-Chang
collection PubMed
description In this study, the complete mitogenome of the tigertooth croaker Otolithes ruber was first determined. This mitogenome is 16,589 bp in length, and consists of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.4% A; 29.1% C; 16.1% G and 27.4% T. Sizes of the 22 tRNA genes range from 66 to 74 bp. Four start codons (ACG, CTG, GTG and ATG) and three stop (AGA, TAG and TAA/TA/T) codons were detected in 13 protein-coding genes. In the Bayesian treebased on the complete mitogenomes of 18 species (including O. ruber) from the family Sciaenidae, all nodes were strongly supported. The phylogenetic results suggested that O. ruber was closed to the black-spotted croaker Protonibea diacanthus.
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spelling pubmed-78007292021-01-19 Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae) Guo, Chang-Chang Liu, Min Lin, Jian-Jie Dai, Fang-Qun Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitogenome of the tigertooth croaker Otolithes ruber was first determined. This mitogenome is 16,589 bp in length, and consists of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.4% A; 29.1% C; 16.1% G and 27.4% T. Sizes of the 22 tRNA genes range from 66 to 74 bp. Four start codons (ACG, CTG, GTG and ATG) and three stop (AGA, TAG and TAA/TA/T) codons were detected in 13 protein-coding genes. In the Bayesian treebased on the complete mitogenomes of 18 species (including O. ruber) from the family Sciaenidae, all nodes were strongly supported. The phylogenetic results suggested that O. ruber was closed to the black-spotted croaker Protonibea diacanthus. Taylor & Francis 2017-02-23 /pmc/articles/PMC7800729/ /pubmed/33473742 http://dx.doi.org/10.1080/23802359.2016.1247676 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Guo, Chang-Chang
Liu, Min
Lin, Jian-Jie
Dai, Fang-Qun
Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)
title Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)
title_full Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)
title_fullStr Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)
title_full_unstemmed Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)
title_short Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae)
title_sort complete mitochondrial genome and the phylogenetic position of the tigertooth croaker otolithes ruber (perciformes: sciaenidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800729/
https://www.ncbi.nlm.nih.gov/pubmed/33473742
http://dx.doi.org/10.1080/23802359.2016.1247676
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