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Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides
Tripsacum dactyloides, known as eastern gamagrass, is used as a donor of valuable traits. It grows naturally in the same region where maize is commercially cultured in the USA and has the ability to hybridize to maize. The wild genotype of eastern gamagrass is threaten by the gene flow from the tran...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800761/ https://www.ncbi.nlm.nih.gov/pubmed/33474032 http://dx.doi.org/10.1080/23802359.2017.1413312 |
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author | Wang, Yanfang Zhao, Mingzhu Li, Li Wang, Kangyu |
author_facet | Wang, Yanfang Zhao, Mingzhu Li, Li Wang, Kangyu |
author_sort | Wang, Yanfang |
collection | PubMed |
description | Tripsacum dactyloides, known as eastern gamagrass, is used as a donor of valuable traits. It grows naturally in the same region where maize is commercially cultured in the USA and has the ability to hybridize to maize. The wild genotype of eastern gamagrass is threaten by the gene flow from the transgenic maize. The circular genome is 141,050 bp in length and contains 120 genes, including 73 protein-coding genes (PCG), 39 transfer RNA genes (tRNA) and eight ribosomal RNA genes (rRNA). The overall nucleotide composition is: 30.8% A, 19.2% C, 19.3% G, 30.7% T, with a total G + C content of 38.5%. The phylogenetic tree was constructed to explore the taxonomic status of Tripsacum dactyloides, which contributes to phylogenetic studies and further conservation strategies for this species. |
format | Online Article Text |
id | pubmed-7800761 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78007612021-01-19 Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides Wang, Yanfang Zhao, Mingzhu Li, Li Wang, Kangyu Mitochondrial DNA B Resour Mitogenome Announcement Tripsacum dactyloides, known as eastern gamagrass, is used as a donor of valuable traits. It grows naturally in the same region where maize is commercially cultured in the USA and has the ability to hybridize to maize. The wild genotype of eastern gamagrass is threaten by the gene flow from the transgenic maize. The circular genome is 141,050 bp in length and contains 120 genes, including 73 protein-coding genes (PCG), 39 transfer RNA genes (tRNA) and eight ribosomal RNA genes (rRNA). The overall nucleotide composition is: 30.8% A, 19.2% C, 19.3% G, 30.7% T, with a total G + C content of 38.5%. The phylogenetic tree was constructed to explore the taxonomic status of Tripsacum dactyloides, which contributes to phylogenetic studies and further conservation strategies for this species. Taylor & Francis 2017-12-07 /pmc/articles/PMC7800761/ /pubmed/33474032 http://dx.doi.org/10.1080/23802359.2017.1413312 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Yanfang Zhao, Mingzhu Li, Li Wang, Kangyu Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides |
title | Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides |
title_full | Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides |
title_fullStr | Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides |
title_full_unstemmed | Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides |
title_short | Characterization of the complete chloroplast genome of the Eastern gamagrass, Tripsacum dactyloides |
title_sort | characterization of the complete chloroplast genome of the eastern gamagrass, tripsacum dactyloides |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800761/ https://www.ncbi.nlm.nih.gov/pubmed/33474032 http://dx.doi.org/10.1080/23802359.2017.1413312 |
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