The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)

The present study provides the first full mitochondrial genome sequence of a long-billed plover from South Korea. This mitogenome is 16,895 bp in length and consists of 13 protein-coding genes, 2 ribosomal-RNA genes, 22 transfer-RNA genes, and a non-coding control region. Overall, base composition w...

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Autores principales: Lee, Mu-Yeong, Jeon, Hey Sook, Lee, Sang-Hwa, An, Junghwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800784/
https://www.ncbi.nlm.nih.gov/pubmed/33473738
http://dx.doi.org/10.1080/23802359.2017.1292473
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author Lee, Mu-Yeong
Jeon, Hey Sook
Lee, Sang-Hwa
An, Junghwa
author_facet Lee, Mu-Yeong
Jeon, Hey Sook
Lee, Sang-Hwa
An, Junghwa
author_sort Lee, Mu-Yeong
collection PubMed
description The present study provides the first full mitochondrial genome sequence of a long-billed plover from South Korea. This mitogenome is 16,895 bp in length and consists of 13 protein-coding genes, 2 ribosomal-RNA genes, 22 transfer-RNA genes, and a non-coding control region. Overall, base composition was: A, 31.4%; C, 31.1%; G, 13.8%; and T, 23.8%. A frameshift mutation in the ND3 gene was identified and a tandem repeat (AACA) was observed in the D-loop region. The phylogenetic analysis based on concatenated coding genes indicated Charadriidae’s monophyly. These results contribute to further understanding of long-billed plover phylogenetic relationships and species identification.
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spelling pubmed-78007842021-01-19 The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae) Lee, Mu-Yeong Jeon, Hey Sook Lee, Sang-Hwa An, Junghwa Mitochondrial DNA B Resour Mitogenome Announcement The present study provides the first full mitochondrial genome sequence of a long-billed plover from South Korea. This mitogenome is 16,895 bp in length and consists of 13 protein-coding genes, 2 ribosomal-RNA genes, 22 transfer-RNA genes, and a non-coding control region. Overall, base composition was: A, 31.4%; C, 31.1%; G, 13.8%; and T, 23.8%. A frameshift mutation in the ND3 gene was identified and a tandem repeat (AACA) was observed in the D-loop region. The phylogenetic analysis based on concatenated coding genes indicated Charadriidae’s monophyly. These results contribute to further understanding of long-billed plover phylogenetic relationships and species identification. Taylor & Francis 2017-02-23 /pmc/articles/PMC7800784/ /pubmed/33473738 http://dx.doi.org/10.1080/23802359.2017.1292473 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Lee, Mu-Yeong
Jeon, Hey Sook
Lee, Sang-Hwa
An, Junghwa
The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)
title The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)
title_full The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)
title_fullStr The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)
title_full_unstemmed The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)
title_short The mitochondrial genome of the long-billed plover, Charadrius placidus (Charadriiformes: Charadriidae)
title_sort mitochondrial genome of the long-billed plover, charadrius placidus (charadriiformes: charadriidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800784/
https://www.ncbi.nlm.nih.gov/pubmed/33473738
http://dx.doi.org/10.1080/23802359.2017.1292473
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