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The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
The complete mitochondrial genome of Chionodraco hamatus was obtained, which was 17 457 bp in length. This genome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while 9 were encoded by...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800830/ https://www.ncbi.nlm.nih.gov/pubmed/33473405 http://dx.doi.org/10.1080/23802359.2015.1137819 |
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author | Song, Wei Li, Lingzhi Huang, Hongliang Meng, Yongyong Jiang, Keji Zhang, Fengying Chen, Xuezhong Ma, Lingbo |
author_facet | Song, Wei Li, Lingzhi Huang, Hongliang Meng, Yongyong Jiang, Keji Zhang, Fengying Chen, Xuezhong Ma, Lingbo |
author_sort | Song, Wei |
collection | PubMed |
description | The complete mitochondrial genome of Chionodraco hamatus was obtained, which was 17 457 bp in length. This genome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while 9 were encoded by light strand. Overall base composition of mitogenome is estimated to be 26.38% for A, 17.44% for G, 26.00% for T, 30.18% for C, respectively, with a slight A + T bias (52.38%). The phylogenetic analysis based on 13 concatenated protein-coding genes suggested that C. hamatus as a sister species to Chionodraco myersi was clustered in family Chionodraco. The complete mitochondrial genome sequence of C. hamatus could provide a basic data for the studies on evolution for low temperature adaptability, population structure, molecular systematic, stock evaluation and conservation genetics. |
format | Online Article Text |
id | pubmed-7800830 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78008302021-01-19 The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration Song, Wei Li, Lingzhi Huang, Hongliang Meng, Yongyong Jiang, Keji Zhang, Fengying Chen, Xuezhong Ma, Lingbo Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Chionodraco hamatus was obtained, which was 17 457 bp in length. This genome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while 9 were encoded by light strand. Overall base composition of mitogenome is estimated to be 26.38% for A, 17.44% for G, 26.00% for T, 30.18% for C, respectively, with a slight A + T bias (52.38%). The phylogenetic analysis based on 13 concatenated protein-coding genes suggested that C. hamatus as a sister species to Chionodraco myersi was clustered in family Chionodraco. The complete mitochondrial genome sequence of C. hamatus could provide a basic data for the studies on evolution for low temperature adaptability, population structure, molecular systematic, stock evaluation and conservation genetics. Taylor & Francis 2016-02-01 /pmc/articles/PMC7800830/ /pubmed/33473405 http://dx.doi.org/10.1080/23802359.2015.1137819 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Song, Wei Li, Lingzhi Huang, Hongliang Meng, Yongyong Jiang, Keji Zhang, Fengying Chen, Xuezhong Ma, Lingbo The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration |
title | The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration |
title_full | The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration |
title_fullStr | The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration |
title_full_unstemmed | The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration |
title_short | The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration |
title_sort | complete mitochondrial genome of chionodraco hamatus (notothenioidei: channichthyidae) with phylogenetic consideration |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800830/ https://www.ncbi.nlm.nih.gov/pubmed/33473405 http://dx.doi.org/10.1080/23802359.2015.1137819 |
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