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The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration

The complete mitochondrial genome of Chionodraco hamatus was obtained, which was 17 457 bp in length. This genome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while 9 were encoded by...

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Autores principales: Song, Wei, Li, Lingzhi, Huang, Hongliang, Meng, Yongyong, Jiang, Keji, Zhang, Fengying, Chen, Xuezhong, Ma, Lingbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800830/
https://www.ncbi.nlm.nih.gov/pubmed/33473405
http://dx.doi.org/10.1080/23802359.2015.1137819
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author Song, Wei
Li, Lingzhi
Huang, Hongliang
Meng, Yongyong
Jiang, Keji
Zhang, Fengying
Chen, Xuezhong
Ma, Lingbo
author_facet Song, Wei
Li, Lingzhi
Huang, Hongliang
Meng, Yongyong
Jiang, Keji
Zhang, Fengying
Chen, Xuezhong
Ma, Lingbo
author_sort Song, Wei
collection PubMed
description The complete mitochondrial genome of Chionodraco hamatus was obtained, which was 17 457 bp in length. This genome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while 9 were encoded by light strand. Overall base composition of mitogenome is estimated to be 26.38% for A, 17.44% for G, 26.00% for T, 30.18% for C, respectively, with a slight A + T bias (52.38%). The phylogenetic analysis based on 13 concatenated protein-coding genes suggested that C. hamatus as a sister species to Chionodraco myersi was clustered in family Chionodraco. The complete mitochondrial genome sequence of C. hamatus could provide a basic data for the studies on evolution for low temperature adaptability, population structure, molecular systematic, stock evaluation and conservation genetics.
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spelling pubmed-78008302021-01-19 The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration Song, Wei Li, Lingzhi Huang, Hongliang Meng, Yongyong Jiang, Keji Zhang, Fengying Chen, Xuezhong Ma, Lingbo Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Chionodraco hamatus was obtained, which was 17 457 bp in length. This genome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while 9 were encoded by light strand. Overall base composition of mitogenome is estimated to be 26.38% for A, 17.44% for G, 26.00% for T, 30.18% for C, respectively, with a slight A + T bias (52.38%). The phylogenetic analysis based on 13 concatenated protein-coding genes suggested that C. hamatus as a sister species to Chionodraco myersi was clustered in family Chionodraco. The complete mitochondrial genome sequence of C. hamatus could provide a basic data for the studies on evolution for low temperature adaptability, population structure, molecular systematic, stock evaluation and conservation genetics. Taylor & Francis 2016-02-01 /pmc/articles/PMC7800830/ /pubmed/33473405 http://dx.doi.org/10.1080/23802359.2015.1137819 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/
spellingShingle Mitogenome Announcement
Song, Wei
Li, Lingzhi
Huang, Hongliang
Meng, Yongyong
Jiang, Keji
Zhang, Fengying
Chen, Xuezhong
Ma, Lingbo
The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
title The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
title_full The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
title_fullStr The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
title_full_unstemmed The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
title_short The complete mitochondrial genome of Chionodraco hamatus (Notothenioidei: Channichthyidae) with phylogenetic consideration
title_sort complete mitochondrial genome of chionodraco hamatus (notothenioidei: channichthyidae) with phylogenetic consideration
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800830/
https://www.ncbi.nlm.nih.gov/pubmed/33473405
http://dx.doi.org/10.1080/23802359.2015.1137819
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