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Complete sequences of the mitochondrial DNA of the Petalonia binghamiae
Here, the complete mitogenome of Petalonia binghamiae (J. Agardh) K. L. Vinogradova was determined and analyzed. The length of the complete P. binghamiae mitogenome was determined to be 37,460 bp. The mitogenome contains a set of 68 genes, including 35 protein-coding genes, 3 rRNA genes, 24 tRNA gen...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800842/ https://www.ncbi.nlm.nih.gov/pubmed/33474079 http://dx.doi.org/10.1080/23802359.2017.1407688 |
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author | Li, Yue Liu, Na Yin, Hongxin Liu, Cui Zhang, Lei Jin, Yuemei Wang, Haiyang Chi, Shan Liu, Tao |
author_facet | Li, Yue Liu, Na Yin, Hongxin Liu, Cui Zhang, Lei Jin, Yuemei Wang, Haiyang Chi, Shan Liu, Tao |
author_sort | Li, Yue |
collection | PubMed |
description | Here, the complete mitogenome of Petalonia binghamiae (J. Agardh) K. L. Vinogradova was determined and analyzed. The length of the complete P. binghamiae mitogenome was determined to be 37,460 bp. The mitogenome contains a set of 68 genes, including 35 protein-coding genes, 3 rRNA genes, 24 tRNA genes, 1 tRNA pseudogene, and 5 unidentified open reading frames (ORFs). The noncoding sequence constitutes 7.03% of the P. binghamiae mtDNA. Twenty-seven of the 35 (77.14%) protein-coding genes ended with a TAA stop codon, 6 (17.14%) with TAG, and 2 (5.71%) with TGA. All protein-coding genes in P. binghamiae were inferred to use the start codon ATG, except for nad11. The mitogenome phylogenetic analysis, based on 35 protein-coding genes, reveals that P. binghamia showed that P. binghamiae was clustered together with P. fascia. The complete mitochondrial genome sequence provided here would be useful for further understanding the evolution of Petalonia. |
format | Online Article Text |
id | pubmed-7800842 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78008422021-01-19 Complete sequences of the mitochondrial DNA of the Petalonia binghamiae Li, Yue Liu, Na Yin, Hongxin Liu, Cui Zhang, Lei Jin, Yuemei Wang, Haiyang Chi, Shan Liu, Tao Mitochondrial DNA B Resour Mitogenome Announcement Here, the complete mitogenome of Petalonia binghamiae (J. Agardh) K. L. Vinogradova was determined and analyzed. The length of the complete P. binghamiae mitogenome was determined to be 37,460 bp. The mitogenome contains a set of 68 genes, including 35 protein-coding genes, 3 rRNA genes, 24 tRNA genes, 1 tRNA pseudogene, and 5 unidentified open reading frames (ORFs). The noncoding sequence constitutes 7.03% of the P. binghamiae mtDNA. Twenty-seven of the 35 (77.14%) protein-coding genes ended with a TAA stop codon, 6 (17.14%) with TAG, and 2 (5.71%) with TGA. All protein-coding genes in P. binghamiae were inferred to use the start codon ATG, except for nad11. The mitogenome phylogenetic analysis, based on 35 protein-coding genes, reveals that P. binghamia showed that P. binghamiae was clustered together with P. fascia. The complete mitochondrial genome sequence provided here would be useful for further understanding the evolution of Petalonia. Taylor & Francis 2018-01-05 /pmc/articles/PMC7800842/ /pubmed/33474079 http://dx.doi.org/10.1080/23802359.2017.1407688 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Yue Liu, Na Yin, Hongxin Liu, Cui Zhang, Lei Jin, Yuemei Wang, Haiyang Chi, Shan Liu, Tao Complete sequences of the mitochondrial DNA of the Petalonia binghamiae |
title | Complete sequences of the mitochondrial DNA of the Petalonia binghamiae |
title_full | Complete sequences of the mitochondrial DNA of the Petalonia binghamiae |
title_fullStr | Complete sequences of the mitochondrial DNA of the Petalonia binghamiae |
title_full_unstemmed | Complete sequences of the mitochondrial DNA of the Petalonia binghamiae |
title_short | Complete sequences of the mitochondrial DNA of the Petalonia binghamiae |
title_sort | complete sequences of the mitochondrial dna of the petalonia binghamiae |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800842/ https://www.ncbi.nlm.nih.gov/pubmed/33474079 http://dx.doi.org/10.1080/23802359.2017.1407688 |
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