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The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species

Solanum berthaultii is a wild species belonging to Solanaceae family. The complete chloroplast genome of S. berthaultii was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. berthaultii was 155,533 bp in length and consisted of 25,593 ...

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Autor principal: Park, Tae-Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800855/
https://www.ncbi.nlm.nih.gov/pubmed/33473725
http://dx.doi.org/10.1080/23802359.2017.1285213
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author Park, Tae-Ho
author_facet Park, Tae-Ho
author_sort Park, Tae-Ho
collection PubMed
description Solanum berthaultii is a wild species belonging to Solanaceae family. The complete chloroplast genome of S. berthaultii was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. berthaultii was 155,533 bp in length and consisted of 25,593 bp of a pair of inverted repeats, 18,372 bp of small single copy and 85,975 bp of large single-copy regions. 158 genes were annotated including 105 protein-coding, 45 tRNA, and 8 rRNA genes. Maximum-likelihood phylogenetic analysis with eight Solanaceae species revealed that S. berthaultii is most closely grouped with S. tuberosum.
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spelling pubmed-78008552021-01-19 The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species Park, Tae-Ho Mitochondrial DNA B Resour Mitogenome Announcement Solanum berthaultii is a wild species belonging to Solanaceae family. The complete chloroplast genome of S. berthaultii was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. berthaultii was 155,533 bp in length and consisted of 25,593 bp of a pair of inverted repeats, 18,372 bp of small single copy and 85,975 bp of large single-copy regions. 158 genes were annotated including 105 protein-coding, 45 tRNA, and 8 rRNA genes. Maximum-likelihood phylogenetic analysis with eight Solanaceae species revealed that S. berthaultii is most closely grouped with S. tuberosum. Taylor & Francis 2017-02-06 /pmc/articles/PMC7800855/ /pubmed/33473725 http://dx.doi.org/10.1080/23802359.2017.1285213 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Park, Tae-Ho
The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species
title The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species
title_full The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species
title_fullStr The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species
title_full_unstemmed The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species
title_short The complete chloroplast genome of Solanum berthaultii, one of the potato wild relative species
title_sort complete chloroplast genome of solanum berthaultii, one of the potato wild relative species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800855/
https://www.ncbi.nlm.nih.gov/pubmed/33473725
http://dx.doi.org/10.1080/23802359.2017.1285213
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