Cargando…
Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region
Cytochrome B (Cyt B) gene and control region of mitochondrial DNA are considered important for evaluating phylogenetic association of a species. In this study, we sequenced Cyt B and control region of Schizothorax plagiostomus and constructed phylogenetic association tree of S. plagiostomus with 23...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800877/ https://www.ncbi.nlm.nih.gov/pubmed/33474026 http://dx.doi.org/10.1080/23802359.2017.1407682 |
_version_ | 1783635451095023616 |
---|---|
author | Khan, Muhammad Fiaz Khattak, Muhammad Nasir Khan He, Dekui Chen, Yifeng |
author_facet | Khan, Muhammad Fiaz Khattak, Muhammad Nasir Khan He, Dekui Chen, Yifeng |
author_sort | Khan, Muhammad Fiaz |
collection | PubMed |
description | Cytochrome B (Cyt B) gene and control region of mitochondrial DNA are considered important for evaluating phylogenetic association of a species. In this study, we sequenced Cyt B and control region of Schizothorax plagiostomus and constructed phylogenetic association tree of S. plagiostomus with 23 schizothoracine fishes. We found S. plagiostomus to be closely associated with S. labiatus, S. richardsonii, S. progastus, and S. esocinus, with high-bootstraps values. Several conserved sequence blocks were identified within D-loop sequences. These are highly conserved within genus Schizothorax compared to other. This study reports the phylogenetic position of the S. plagiostomus among schizothoracines fishes and organization of D-loop region in S. plagiostomus from Pakistan. |
format | Online Article Text |
id | pubmed-7800877 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78008772021-01-19 Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region Khan, Muhammad Fiaz Khattak, Muhammad Nasir Khan He, Dekui Chen, Yifeng Mitochondrial DNA B Resour Mito Communication Cytochrome B (Cyt B) gene and control region of mitochondrial DNA are considered important for evaluating phylogenetic association of a species. In this study, we sequenced Cyt B and control region of Schizothorax plagiostomus and constructed phylogenetic association tree of S. plagiostomus with 23 schizothoracine fishes. We found S. plagiostomus to be closely associated with S. labiatus, S. richardsonii, S. progastus, and S. esocinus, with high-bootstraps values. Several conserved sequence blocks were identified within D-loop sequences. These are highly conserved within genus Schizothorax compared to other. This study reports the phylogenetic position of the S. plagiostomus among schizothoracines fishes and organization of D-loop region in S. plagiostomus from Pakistan. Taylor & Francis 2017-11-27 /pmc/articles/PMC7800877/ /pubmed/33474026 http://dx.doi.org/10.1080/23802359.2017.1407682 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mito Communication Khan, Muhammad Fiaz Khattak, Muhammad Nasir Khan He, Dekui Chen, Yifeng Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region |
title | Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region |
title_full | Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region |
title_fullStr | Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region |
title_full_unstemmed | Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region |
title_short | Phylogenetic association of Schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome B gene and control region |
title_sort | phylogenetic association of schizothorax plagiostomus with other schizothoracine fishes based on mitochondrial cytochrome b gene and control region |
topic | Mito Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800877/ https://www.ncbi.nlm.nih.gov/pubmed/33474026 http://dx.doi.org/10.1080/23802359.2017.1407682 |
work_keys_str_mv | AT khanmuhammadfiaz phylogeneticassociationofschizothoraxplagiostomuswithotherschizothoracinefishesbasedonmitochondrialcytochromebgeneandcontrolregion AT khattakmuhammadnasirkhan phylogeneticassociationofschizothoraxplagiostomuswithotherschizothoracinefishesbasedonmitochondrialcytochromebgeneandcontrolregion AT hedekui phylogeneticassociationofschizothoraxplagiostomuswithotherschizothoracinefishesbasedonmitochondrialcytochromebgeneandcontrolregion AT chenyifeng phylogeneticassociationofschizothoraxplagiostomuswithotherschizothoracinefishesbasedonmitochondrialcytochromebgeneandcontrolregion |