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Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea
The first complete chloroplast genome sequences of Korean endemic Epilobium in Ulleung Island, Epilobium ulleungensis, were reported in this study. The E. ulleungensis plastome was 160,912 bp long, with the large single copy (LSC) region of 88,915 bp, the small single copy (SSC) region of 17,327 bp,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800878/ https://www.ncbi.nlm.nih.gov/pubmed/33474291 http://dx.doi.org/10.1080/23802359.2018.1481796 |
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author | Yang, Ji Young Chung, Jae-Min Kim, Seung-Chul |
author_facet | Yang, Ji Young Chung, Jae-Min Kim, Seung-Chul |
author_sort | Yang, Ji Young |
collection | PubMed |
description | The first complete chloroplast genome sequences of Korean endemic Epilobium in Ulleung Island, Epilobium ulleungensis, were reported in this study. The E. ulleungensis plastome was 160,912 bp long, with the large single copy (LSC) region of 88,915 bp, the small single copy (SSC) region of 17,327 bp, and two inverted repeat (IR) regions of 27,335 bp. The plastome contained 131 genes, including 84 protein-coding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.5%. Phylogenetic analysis of nine representative plastomes within the family Onagraceae suggests strongly that E. ulleungensis is sister to the clade containing species of Oenothera in tribe Onagreae. |
format | Online Article Text |
id | pubmed-7800878 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-78008782021-01-19 Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea Yang, Ji Young Chung, Jae-Min Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Korean endemic Epilobium in Ulleung Island, Epilobium ulleungensis, were reported in this study. The E. ulleungensis plastome was 160,912 bp long, with the large single copy (LSC) region of 88,915 bp, the small single copy (SSC) region of 17,327 bp, and two inverted repeat (IR) regions of 27,335 bp. The plastome contained 131 genes, including 84 protein-coding, eight ribosomal RNA, and 37 transfer RNA genes. The overall GC content was 36.5%. Phylogenetic analysis of nine representative plastomes within the family Onagraceae suggests strongly that E. ulleungensis is sister to the clade containing species of Oenothera in tribe Onagreae. Taylor & Francis 2018-06-27 /pmc/articles/PMC7800878/ /pubmed/33474291 http://dx.doi.org/10.1080/23802359.2018.1481796 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yang, Ji Young Chung, Jae-Min Kim, Seung-Chul Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea |
title | Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea |
title_full | Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea |
title_fullStr | Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea |
title_full_unstemmed | Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea |
title_short | Complete chloroplast genome of Ulleung Island endemic, Epilobium ulleungensis (Onagraceae), in Korea |
title_sort | complete chloroplast genome of ulleung island endemic, epilobium ulleungensis (onagraceae), in korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800878/ https://www.ncbi.nlm.nih.gov/pubmed/33474291 http://dx.doi.org/10.1080/23802359.2018.1481796 |
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